BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17317 (UTR included)
(2101 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01016A1E01 1211 0.0
BF01021A1C09 462 e-129
>BF01016A1E01
Length = 635
Score = 1211 bits (611), Expect = 0.0
Identities = 629/635 (99%)
Strand = Plus / Plus
Query: 445 tatttcttcacatctccttcaatttggaatattaatacaacaaacccctattagaaatgg 504
||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1 tatttcttcacatctccctcaatttagaatattaatacaacaaacccctattagaaatgg 60
Query: 505 atatagatattccacccaatgaatatttttctagttatgaagatctagaggttcatagat 564
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 61 atatagatattccacccaatgaatatttttctagttatgaagatctagaggtccatagat 120
Query: 565 tgatgttagaagacaatccacgcacggatggttatcgccaggctattatgtccaataaat 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgatgttagaagacaatccacgcacggatggttatcgccaggctattatgtccaataaat 180
Query: 625 tgtatttcaaagacaaagtcgtaatggacgttggttgtgggactggcatcctctcaatat 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgtatttcaaagacaaagtcgtaatggacgttggttgtgggactggcatcctctcaatat 240
Query: 685 tttgtgcccaagcaggtgcaaagaaggtttacgctgtagaagctagcaatttagctaatt 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tttgtgcccaagcaggtgcaaagaaggtttacgctgtagaagctagcaatttagctaatt 300
Query: 745 tagcaaaggacattgtgaaagaaaataatcttgacaacgttatcgaagtaatacacagta 804
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 301 tagcaaaggacattgtgaaagaaaataatcttgacaatgttatcgaagtaatacacagta 360
Query: 805 aagtggaagatgttattctgccagatggattaaaagttgatgctatcgtctcggaatgga 864
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 361 aagtggaagatgttattctgccagatggattaaaagttgatgctattgtctcggaatgga 420
Query: 865 tgggattctacttgctacatgagggtatgttagactctgtgttgattgcgagggacaagt 924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgggattctacttgctacatgagggtatgttagactctgtgttgattgcgagggacaagt 480
Query: 925 ttctcaaagaggatggtgaaatgtttccagaaagtgctggcatatatgttgcaccatgta 984
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 481 ttctcaaagaggatggtgaaatgtttccagaaagtgctggcatctatgttgcaccatgta 540
Query: 985 gtgttcctgaattatatactaaatggacaaacttccatggtgtgtcattaacaacatttg 1044
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtgttcctgaattatatactaaatggacaaacttccatggtgtgtcattaacaacatttg 600
Query: 1045 cgaagcaacttcgtgcaaacaaaagcagcaagcca 1079
|||||||||||||||||||||||||||||||||||
Sbjct: 601 cgaagcaacttcgtgcaaacaaaagcagcaagcca 635
>BF01021A1C09
Length = 784
Score = 462 bits (233), Expect = e-129
Identities = 245/249 (98%)
Strand = Plus / Minus
Query: 1 cataatagaatacacatataaatatttctagcgtgcatgaatagcaaaatacaaaagtga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 cataatagaatacacatataaatatttctagcgtgcatgaatagcaaaatacaaaagtga 190
Query: 61 aaagttttactcggttaaaacagtgcatacttcacacctaacattcttaggtctgaagtt 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 aaagtttaactcggttaaaacagtgcatacttcacacctaacattcttaggtctgaagtt 130
Query: 121 gcagttgttagttgttacttgttaagccaataacgaatactacatgtcgatttatcgaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 gcagttgttagttgttacttgttaagccaataacgaatactacatgtcgatttatcgaaa 70
Query: 181 cgattttcgatgtaagcgtaacgagacatttataatctgtgaagaatttattcataaaat 240
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 69 cgattttcgatggaggcgtaacgagacatttataatctgtgaagaatttattcataaagt 10
Query: 241 catctacac 249
|||||||||
Sbjct: 9 catctacac 1
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 238,929
Number of extensions: 4344
Number of successful extensions: 4344
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4344
Number of HSP's successfully gapped: 2
Length of query: 2101
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2084
Effective length of database: 8,119,229
Effective search space: 16920473236
Effective search space used: 16920473236
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)