BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17321 (UTR included)
(2857 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2643_C1 989 0.0
>BF14_2643_C1
Length = 689
Score = 989 bits (499), Expect = 0.0
Identities = 499/499 (100%)
Strand = Plus / Plus
Query: 2359 gccgcacgctgtgctagaccgatagcaatactaggcttagtgcgagcgcgcgcgtcgctc 2418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gccgcacgctgtgctagaccgatagcaatactaggcttagtgcgagcgcgcgcgtcgctc 60
Query: 2419 gctagttgtagcgtagagacgactataatagctgcgacttcgccgggcgcgcgcccaccg 2478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gctagttgtagcgtagagacgactataatagctgcgacttcgccgggcgcgcgcccaccg 120
Query: 2479 cgcccgttgaatctcattttgtgatcttatacttaattctcctgtgttataatttaggtt 2538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgcccgttgaatctcattttgtgatcttatacttaattctcctgtgttataatttaggtt 180
Query: 2539 aaattttatatcatcgacgccgtaaggaacgaatacgctacgtattcggaatgtatagtt 2598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaattttatatcatcgacgccgtaaggaacgaatacgctacgtattcggaatgtatagtt 240
Query: 2599 atacctgttatatattgaagaatgatactattgagtctttgaatagtgaaccttgccatt 2658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atacctgttatatattgaagaatgatactattgagtctttgaatagtgaaccttgccatt 300
Query: 2659 aaagagaaagtaattatatagactagactgaaatgtaaaatatcactattttatgctctg 2718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaagagaaagtaattatatagactagactgaaatgtaaaatatcactattttatgctctg 360
Query: 2719 ttggcgtacgaaatagaactatgttgttgaaggatgcgaagtacccgctggagtaggtac 2778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttggcgtacgaaatagaactatgttgttgaaggatgcgaagtacccgctggagtaggtac 420
Query: 2779 gtgatgacgttgacgatcgatgacgttcccaatagtgactaaaacaaagatattatatat 2838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtgatgacgttgacgatcgatgacgttcccaatagtgactaaaacaaagatattatatat 480
Query: 2839 tgaattgttaataattata 2857
|||||||||||||||||||
Sbjct: 481 tgaattgttaataattata 499
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 314,836
Number of extensions: 18777
Number of successful extensions: 18777
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 18775
Number of HSP's successfully gapped: 1
Length of query: 2857
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2840
Effective length of database: 8,119,229
Effective search space: 23058610360
Effective search space used: 23058610360
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)