BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17322 (UTR included)
(3244 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01032B2C08 1400 0.0
>BF01032B2C08
Length = 789
Score = 1400 bits (706), Expect = 0.0
Identities = 739/750 (98%)
Strand = Plus / Plus
Query: 1955 agaagaaaggatgaacggcgcccaagttgataaggcgttgcgttcgaccatcgaatggga 2014
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40 agaagaaaggatgaacggcgcccaagttgataaggcgttgcgttcgaccatcgaatggga 99
Query: 2015 tgtgcttagactcaaagaagagttcaaagaagaaagagccctggccgctaaacaagcgga 2074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 tgtgcttagactcaaagaagagttcaaagaagaaagagccctggccgctaaacaagcgga 159
Query: 2075 gagagaaagacagtcactgatagaagagaagaagttggagagagaaagactgaaggctgc 2134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 gagagaaagacagtcactgatagaagagaagaagttggagagagaaagactgaaggctgc 219
Query: 2135 cagagaaacacgtgttagatctagccgaggttcaaaagctctgtcatcaaacatgttgcc 2194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 cagagaaacacgtgttagatctagccgaggttcaaaagctctgtcatcaaacatgttgcc 279
Query: 2195 ggggctgaataaagttcacaacgaagtgttcacagcagatggtattatagaaagagctaa 2254
||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 280 gggtctgaataaagttcacaacgaagtgttcacagcagatggtattatagaacgagctaa 339
Query: 2255 tcggagaccacataaaaacaaacatggaacaatccagtcatcggataaaaataaagataa 2314
||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||
Sbjct: 340 tcggagaccacttaaaaacaaacatggaacaatccaggcatcagataaaaataaagataa 399
Query: 2315 tcaatcaaatgtaagccagaacacacaaaatcaagacgtagctgtactaacaaaattacc 2374
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 tcaatcagatgtaagccagaacacacaaaatcaagacgtagctgtactaacaaaattacc 459
Query: 2375 accaatgcaaactaaaacgcccgaagccgtcaatactttgccacctattccaccgaatat 2434
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 460 accaatgcaaactaaaacgcctgaagccgtcaatactttgccacctattccaccgaacat 519
Query: 2435 tgaaaccggctctttggtagttttaacggtcgatgacccctcttcacccgccaaaaaaat 2494
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 520 tgaaaccggctctttggtagttttaacggtcgatgatccctcttcacccgccaaaaaaat 579
Query: 2495 gctacagacatacatcgctcgtggcccgggtcagttgacgccagtcgcattacccacaac 2554
||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 580 gctacagacatacatcgctcgcggcccgggacagttgacgccagtcgcattacccacaac 639
Query: 2555 cttcttaaactccgtggtagggtatatgaagaaaaacaaaggtcaagggtcaccacaaat 2614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 cttcttaaactccgtggtagggtatatgaagaaaaacaaaggtcaagggtcaccacaaat 699
Query: 2615 catgtcgccgggcagcgctgcaagctacgacagcagatcgagcggaactcccggagtccc 2674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 catgtcgccgggcagcgctgcaagctacgacagcagatcgagcggaactcccggagtccc 759
Query: 2675 aaacatttcagtgttgccaagtccagcaaa 2704
||||||||||||||||||||||||||||||
Sbjct: 760 aaacatttcagtgttgccaagtccagcaaa 789
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 400,856
Number of extensions: 8554
Number of successful extensions: 8554
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8552
Number of HSP's successfully gapped: 1
Length of query: 3244
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3226
Effective length of database: 8,109,745
Effective search space: 26162037370
Effective search space used: 26162037370
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)