BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17324 (UTR included)
(3007 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01044B1H10 1382 0.0
>BF01044B1H10
Length = 711
Score = 1382 bits (697), Expect = 0.0
Identities = 706/709 (99%)
Strand = Plus / Plus
Query: 1246 cacaagagatattgttcattggcaaaacagttgtactctttggatttgatccaaaaaaag 1305
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1 cacaagagatattgttcattggcaaaacggttgtactctttggatttgatccaaaaaaag 60
Query: 1306 taaaaaaacacagttccctgacaaatcgatccatgttaaccttacaaaagatgaacgctg 1365
| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttaaaaaacacagctccctgacaaatcgatccatgttaaccttacaaaagatgaacgctg 120
Query: 1366 attccagaagattcaccatatgggaggagaaagaagcagagttccatgaaaagttacaaa 1425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 attccagaagattcaccatatgggaggagaaagaagcagagttccatgaaaagttacaaa 180
Query: 1426 aactcaaaacacccgaattctttgaagtgtgcaatttgagaagtgtgattcgtgagatca 1485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aactcaaaacacccgaattctttgaagtgtgcaatttgagaagtgtgattcgtgagatca 240
Query: 1486 aggagtgtgtcactaagcacctatgggctgtggcggtcgaggaggcgcaattaatacacg 1545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aggagtgtgtcactaagcacctatgggctgtggcggtcgaggaggcgcaattaatacacg 300
Query: 1546 aacttcatctcatgaaggacttctatttgttgggacggggagagttgttcttggagctgt 1605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aacttcatctcatgaaggacttctatttgttgggacggggagagttgttcttggagctgt 360
Query: 1606 taaggttgaccgctcctatgcttgataaagcaactacgaggacgtctaccagagacatga 1665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 taaggttgaccgctcctatgcttgataaagcaactacgaggacgtctaccagagacatga 420
Query: 1666 accatgcattccaactagctgccagagcagtatttctcagtaacagtgcggatgttgaaa 1725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 accatgcattccaactagctgccagagcagtatttctcagtaacagtgcggatgttgaaa 480
Query: 1726 aatttagttttgagttgccatatgttaaaccaaacatctcattgtcagctaattctacta 1785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aatttagttttgagttgccatatgttaaaccaaacatctcattgtcagctaattctacta 540
Query: 1786 tagaagatggtagtagtacagttgccgatggttggtcgaccattattcttaagtatgact 1845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tagaagatggtagtagtacagttgccgatggttggtcgaccattattcttaagtatgact 600
Query: 1846 tcaaatggcctctacacttactcttcgccccggaagtgctcgctagatacaacgacatgt 1905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tcaaatggcctctacacttactcttcgccccggaagtgctcgctagatacaacgacatgt 660
Query: 1906 tcaggctgttgttgaggataaagaaaacacagcacgacttgcatgctct 1954
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tcaggctgttgttgaggataaagaaaacacagcacgacttgcatgctct 709
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 378,082
Number of extensions: 7602
Number of successful extensions: 7602
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7602
Number of HSP's successfully gapped: 1
Length of query: 3007
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2989
Effective length of database: 8,109,745
Effective search space: 24240027805
Effective search space used: 24240027805
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)