BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17325 (UTR included)
(3136 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01021A1C09 1483 0.0
BF01049A1H06 628 e-179
BF01049B2D01 293 9e-79
>BF01021A1C09
Length = 784
Score = 1483 bits (748), Expect = 0.0
Identities = 775/784 (98%)
Strand = Plus / Plus
Query: 209 gtgtagatgattttatgaataaattcttcacagattataaatgtctcgttacgcttacat 268
|||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 1 gtgtagatgactttatgaataaattcttcacagattataaatgtctcgttacgcctccat 60
Query: 269 cgaaaatcgtttcgataaatcgacatgtagtattcgttattggcttaacaagtaacaact 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgaaaatcgtttcgataaatcgacatgtagtattcgttattggcttaacaagtaacaact 120
Query: 329 aacaactgcaacttcagacctaagaatgttaggtgtgaagtatgcactgttttaaccgag 388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aacaactgcaacttcagacctaagaatgttaggtgtgaagtatgcactgttttaaccgag 180
Query: 389 taaaacttttcacttttgtattttgctattcatgcacgctagaaatatttatatgtgtat 448
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttaaacttttcacttttgtattttgctattcatgcacgctagaaatatttatatgtgtat 240
Query: 449 tctattatgttttatgttcttttaaaagacagtagtagtgtttaagttaaatatggctaa 508
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tctattatgtttaatgttcttttaaaagacagtagtagtgtttaagttaaatatggctaa 300
Query: 509 agaaggagacatgtcgctgtttaacgatgtgttggaaccgtttaggcgggttataaacac 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agaaggagacatgtcgctgtttaacgatgtgttggaaccgtttaggcgggttataaacac 360
Query: 569 cgacttgccaaaggataagttgtcggcgtctgctaaattaaatttttctgatagtaatca 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cgacttgccaaaggataagttgtcggcgtctgctaaattaaatttttctgatagtaatca 420
Query: 629 atctatcaaagaaggttctacaactttattttcgtctatcaagaggaaatctggcttaga 688
|||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 421 atctatcaaagaaggttctacaactttattttcgtctaccaagaggaaatctggtttaga 480
Query: 689 aaatccaactcctgaaaaacgaatacgtacagaatcaggatcgaattctaatggtccacc 748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aaatccaactcctgaaaaacgaatacgtacagaatcaggatcgaattctaatggtccacc 540
Query: 749 tccatctccatgggaagctaaaagactgaaaattgatttgatagcagccaaagcacagat 808
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tccatctccatgggaagccaaaagactgaaaattgatttgatagcagccaaagcacagat 600
Query: 809 aaccaagctagaagctcgtgttaaccatcagcacacaatacgtaaggaaatgcaaatact 868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aaccaagctagaagctcgtgttaaccatcagcacacaatacgtaaggaaatgcaaatact 660
Query: 869 gtttgaggaggagaaagcctctttgatagaacaacacaaacacgatgaaagggctctgtc 928
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gtttgaggaggagaaagcctctttgatagaacaacacaaacacgatgaaagggctctgtc 720
Query: 929 ggatatggaagatcgtctcaagttgattagacgaagggaacttgaaattaaagaagaata 988
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 721 ggatatggaagatcgtctcaagttgattagacgaagggaactcgaaattaaagaagaata 780
Query: 989 taac 992
||||
Sbjct: 781 taac 784
>BF01049A1H06
Length = 747
Score = 628 bits (317), Expect = e-179
Identities = 323/325 (99%)
Strand = Plus / Minus
Query: 2808 tttattagaaatggaattttttttaatgtccgaggtatgttgtgaggatttttttgcatc 2867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 tttattagaaatggaattttttttaatgtccgaggtatgttgtgaggatttttttgcatc 688
Query: 2868 aatgtatgttatatcagtgattaaaagtagcgtagttatctcatttgtatatagtacatt 2927
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 aatgtatgttatatcagtgattaaaagtagcgtagttatctcatttgtatatagtacatt 628
Query: 2928 tatttcatgctagcaatttttgaactttaaactgctggctgaacagatatcttaaatgtg 2987
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 627 tatttcatgctagcaatttttgaattttaaactgctggctgaacagatatcttaaatgtg 568
Query: 2988 aaaaaaataattgtattattatagaaaaacagcattgtttgtgtccgtagcaatgaagat 3047
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 aaaaaaataattgtattattatagaaaaacagcattgtttgtgtccgtagcaatgaagat 508
Query: 3048 gagtacattttctccacacttctaaaggcattttatataagttctttcaaaatttttatt 3107
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gagtacattttctccacaattctaaaggcattttatataagttctttcaaaatttttatt 448
Query: 3108 gtgatatatgttgaattattttcag 3132
|||||||||||||||||||||||||
Sbjct: 447 gtgatatatgttgaattattttcag 423
>BF01049B2D01
Length = 661
Score = 293 bits (148), Expect = 9e-79
Identities = 194/212 (91%), Gaps = 8/212 (3%)
Strand = Plus / Minus
Query: 2925 atttatttcatgctagcaatttttgaactttaaactgctggctgaacagatatcttaaat 2984
|||||||||||||||||||||||| |||||||||| ||| ||| |||||
Sbjct: 661 atttatttcatgctagcaattttt--------aactgctggccgaaaagannnnntaaat 610
Query: 2985 gtgaaaaaaataattgtattattatagaaaaacagcattgtttgtgtccgtagcaatgaa 3044
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 gtgaaaaaaataattgtattattatagaaaaacagcattgtttgtgtccgtagcaatgaa 550
Query: 3045 gatgagtacattttctccacacttctaaaggcattttatataagttctttcaaaattttt 3104
||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 549 gatgagtacattttctccacaattctaaaggcattttatataagtattttcaaaattttt 490
Query: 3105 attgtgatatatgttgaattattttcagtact 3136
||||||||||||||||||||||||||||||||
Sbjct: 489 attgtgatatatgttgaattattttcagtact 458
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 325,162
Number of extensions: 5457
Number of successful extensions: 5457
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 5457
Number of HSP's successfully gapped: 3
Length of query: 3136
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3118
Effective length of database: 8,109,745
Effective search space: 25286184910
Effective search space used: 25286184910
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)