BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17340 (UTR included)
(2317 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01059B1F04 1193 0.0
>BF01059B1F04
Length = 799
Score = 1193 bits (602), Expect = 0.0
Identities = 608/610 (99%)
Strand = Plus / Plus
Query: 935 ggtgaaggtactgtatgtgcgtaatttcgagattcggacgaccccggacgtgatccaaaa 994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 ggtgaaggtactgtatgtgcgtaatttcgagattcggacgaccccggacgtgatccaaaa 249
Query: 995 ggttttcgaatccaccattaaccacaaagtggaacgagtaaaaaaaatatatgactatgc 1054
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ggttttcgaatccaccattaaccacaaagtggaacgagtaaaaaaaatatatgactatgc 309
Query: 1055 gttcatacatttttacgaaagagaacacgcagagcttgctatagcgaaattacaaaacgc 1114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gttcatacatttttacgaaagagaacacgcagagcttgctatagcgaaattacaaaacgc 369
Query: 1115 agacatcgacggtagtaacattgaaataagatgggccaagcccgtcgaccgcgacctgta 1174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 agacatcgacggtagtaacattgaaataagatgggccaagcccgtcgaccgcgacctgta 429
Query: 1175 ccgcatacagaaactcagtagaggcaatgcgaagtttaacaatagcttggatttgactca 1234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ccgcatacagaaactcagtagaggcaatgcgaagtttaacaatagcttggatttgactca 489
Query: 1235 aaccctgttgctttataaacatcacatcgaaaagcaggagtacgcaaacggtcccaagga 1294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 aaccctgttgctttataaacatcacatcgaaaagcaggagtacgcaaacggtcccaagga 549
Query: 1295 cgaaggcatcggctcggcctgcgctgggggcagttcctgttgctctccgacagacgcaaa 1354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 cgaaggcatcggctcggcctgcgctgggggcagttcctgttgctctccgacagacgcaaa 609
Query: 1355 gcctccagtgtattatcaggcaccagctaactatattctggcaacagttaagctggaatc 1414
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 610 gcctccagtgtattatcaggcaccagctaactatattctggcaacggttaagctggaatc 669
Query: 1415 catgtgcaaacgctacatgtggtctccaccagtatatgactatcaaaagtatgtggatcc 1474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 catgtgcaaacgctacatgtggtctccaccagtatatgactatcaaaagtatgtggatcc 729
Query: 1475 tactggcacagaactatgggtgtgccgtgtggagctgcctcaagtgggtctgccgctgtt 1534
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 730 tactggcacagaactatgggtgtgccgtgtggagctgcctcaagtgggtctgccgctgct 789
Query: 1535 gtctgttgcg 1544
||||||||||
Sbjct: 790 gtctgttgcg 799
Score = 77.8 bits (39), Expect = 7e-14
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 901 cagaacctgacatagacgacgagcagatgcaaagggtga 939
|||||||||||||||||||||||||||||||||||||||
Sbjct: 12 cagaacctgacatagacgacgagcagatgcaaagggtga 50
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 258,129
Number of extensions: 5435
Number of successful extensions: 5435
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5435
Number of HSP's successfully gapped: 2
Length of query: 2317
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2300
Effective length of database: 8,119,229
Effective search space: 18674226700
Effective search space used: 18674226700
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)