BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17345 (UTR included)
(816 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_250_C1 944 0.0
>BF14_250_C1
Length = 740
Score = 944 bits (476), Expect = 0.0
Identities = 488/491 (99%), Gaps = 2/491 (0%)
Strand = Plus / Plus
Query: 30 cagatcacgaaatcaaacagctgacgaacgatgtttatgctgtcatagctggcctgccat 89
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 cagatcacgaaatcaaacagctgacgaacgatgtttatgctgtcatagctggcctgccat 280
Query: 90 tgccgtttgttggcgtggcaggggtcagtgcgtgcgcacagatcaaatacgctgattctg 149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 tgccgtttgttggcgtggcaggggtcagtgcgtgcgcacagatcaaatacgctgattctg 340
Query: 150 gtgaaccggcgccgtgccctctggctgctgacaaagagtacatatacaccaactccttcc 209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 gtgaaccggcgccgtgccctctggctgctgacaaagagtacatatacaccaactccttcc 400
Query: 210 acatagagaagttctacccccaagtaccccttagagtgcattggggtttgaacgatggca 269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 acatagagaagttctacccccaagtaccccttagagtgcattggggtttgaacgatggca 460
Query: 270 acaccgacattatgtgcttcgaaataccagctgttatcgccaagtaagtaatttcgtaaa 329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 acaccgacattatgtgcttcgaaataccagctgttatcgccaagtaagtaatttcgtaaa 520
Query: 330 cagaaattatgtcatttaaaaatttctagttttctatcgaaattaagaatttgatttata 389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 cagaaattatgtcatttaaaaatttctagttttctatcgaaattaagaatttgatttata 580
Query: 390 tttttattaataaaaatttataatc--tatatatatatattaaattttcattcggatatt 447
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 581 tttttattaataaaaatttataatctatatatatatatattaaattttcattcggatatt 640
Query: 448 ttataataattgtttgtcagtagcttgtttaagtcgtatagatttatataataataaacg 507
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 ttataataatcgtttgtcagtagcttgtttaagtcgtatagatttatataataataaacg 700
Query: 508 catattaaaaa 518
|||||||||||
Sbjct: 701 catattaaaaa 711
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 151,720
Number of extensions: 8495
Number of successful extensions: 8495
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8494
Number of HSP's successfully gapped: 1
Length of query: 816
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 799
Effective length of database: 8,119,229
Effective search space: 6487263971
Effective search space used: 6487263971
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 33 (65.9 bits)