BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17346 (UTR included)
(3001 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01059B1E01 1612 0.0
>BF01059B1E01
Length = 854
Score = 1612 bits (813), Expect = 0.0
Identities = 836/845 (98%)
Strand = Plus / Plus
Query: 1603 atagaaatggtaaagaaagtcatagacatgataaagaaagagacagttatagggaccaca 1662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 atagaaatggtaaagaaagtcatagacatgataaagaaagagacagttatagggaccaca 69
Query: 1663 aagataagccaaaagataaaaatgttaggagtagtgatagagaaagtaaaatatataacc 1722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 aagataagccaaaagataaaaatgttaggagtagtgatagagaaagtaaaatatataacc 129
Query: 1723 gaaagcgtagtagaagtcgatctagaagagataattcaaaagatagaatacacgaaagaa 1782
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 130 gaaagcgtagtagaagtcgatctagaagagataattcacaagatagaatacacgaaagaa 189
Query: 1783 gacaagataagacgagatatcctaaagatatgagtaagtctagagaggacagagaaaaaa 1842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 gacaagataagacgagatatcctaaagatatgagtaagtctagagaggacagagaaaaaa 249
Query: 1843 agaaagaatcacatgaatatgttgagaataaaagggataatcgtaattattataattcaa 1902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 agaaagaatcacatgaatatgttgagaataaaagggataatcgtaattattataattcaa 309
Query: 1903 gatcatcaccgagtaaaaaatttagaaaagaatcaccatcaaaacggcatagagagagag 1962
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gatcatcaccgagtaaaaaaattagaaaagaatcaccatcaaaacggcatagagagagag 369
Query: 1963 aattaagcaggagtagagataggagtgacagaaacagacaagaaaataatggtgttcatc 2022
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 aattaagcaggagtagagataggagtgacagaaacagacaagaaaataatggtgttcatc 429
Query: 2023 caaggtatagagaatctagtaattatacacacaataaagaaagtaaaagtgaaaaaatta 2082
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 caaggtatagagaatctaataattatacacacaataaagaaagtaaaagtgaaaaaatta 489
Query: 2083 aagaaaatactaaaggtatagaatcaaagacaccatcaccagttacgaaggaaaataaaa 2142
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 490 aagaaaatactaaaggtatagaatcaaagacaccatcaccagttacgaaggaaactaaaa 549
Query: 2143 cacaatcctcaaaatcacaaaagaaaaccaaaaagagttgcaaagagaagacagaagact 2202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 cacaatcctcaaaatcacaaaagaaaaccaaaaagagttgcaaagagaagacagaagact 609
Query: 2203 caaaatccaaaaagaaggaacgtaaaactaaaaaacgtaagcgctcaacatcatcttcag 2262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 caaaatccaaaaagaaggaacgtaaaactaaaaaacgtaagcgctcaacatcatcttcag 669
Query: 2263 aatcatcggattcaagttctagcagtgatagcagttcgagtgaaagtgatagaaggaaaa 2322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 aatcatcggattcaagttctagcagtgatagcagttcgagtgaaagtgatagaaggaaaa 729
Query: 2323 agaaaatcagaagaaaaaagagaaaatattcaacatctagcagtagttctgagagcacct 2382
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 annnnatcagaagaaaaaagagaaaatattcaacatctagcagtagttctgagagcacct 789
Query: 2383 caagcagctcatcaagcagttcggacaccagtacagcgtcaagttccagtaccgatagta 2442
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 790 caagcagctcatcaagcagttcggacaccagtacagtgtcaagttccagtaccgatagta 849
Query: 2443 gctgc 2447
|||||
Sbjct: 850 gctgc 854
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 439,319
Number of extensions: 10225
Number of successful extensions: 10225
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 10225
Number of HSP's successfully gapped: 1
Length of query: 3001
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2983
Effective length of database: 8,109,745
Effective search space: 24191369335
Effective search space used: 24191369335
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)