BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17353 (UTR included)
(2461 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01033B2E11 1467 0.0
>BF01033B2E11
Length = 802
Score = 1467 bits (740), Expect = 0.0
Identities = 793/810 (97%), Gaps = 8/810 (0%)
Strand = Plus / Plus
Query: 1544 tgtatcaacagctgtagcgacaccctctggtctgatcacacccattatattcaacgctga 1603
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1 tgtatcaacagctgtagcgacaccctctggtctgatcacacccattatattcaatgctga 60
Query: 1604 ttccatcgggatcatcgagatatccaaggagatgaagaagttagcggccaaagcgaggga 1663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttccatcgggatcatcgagatatccaaggagatgaagaagttagcggccaaagcgaggga 120
Query: 1664 aggaaaacttcagcctcaggaatttgtcggaggcacagtcacagtctccaatctaggaat 1723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aggaaaacttcagcctcaggaatttgtcggaggcacagtcacagtctccaatctaggaat 180
Query: 1724 gtttggtatcgcaaacttcacatctataatcaacccgcctcaatctctgatactgtctgt 1783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 181 gtttggtatcgcaaacttcacatctataatcaacccgcctcaatctctgatactgtccgt 240
Query: 1784 cggtggactacaggatatgatgattccagataaaaatgaaccacaagggttccgcttcgc 1843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cggtggactacaggatatgatgattccagataaaaatgaaccacaagggttccgcttcgc 300
Query: 1844 aaaggtcatgacattcaccgcgtcagctgatcaccgcgtcatagacggggcggtcggcgc 1903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaaggtcatgacattcaccgcgtcagctgatcaccgcgtcatagacggggcggtcggcgc 360
Query: 1904 tcaatggatgaaggaattgagagaaaacatcgaagatccagccaacatcatactgtaaac 1963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcaatggatgaaggaattgagagaaaacatcgaagatccagccaacatcatactgtaaac 420
Query: 1964 aatactgactgactcacactactatgagttttgatacacttcatttaatgtagagattca 2023
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 421 aatactgactgactcacactactatgagttttgatacacttca-ttaatgtagagattta 479
Query: 2024 atactctatgaatgtttgacaaccctgaacatatccatctatggttttcatattgtgttt 2083
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 480 atactctatgaatgtttgacaaccctgaacatatccatctatggtttttatattgtgttt 539
Query: 2084 gacaaccctgaacctatgttttttatttttcatattgctttagtctggcctagtacataa 2143
|||||||||||||||||| ||| |||| ||||||||||||||||||||||||||
Sbjct: 540 gacaaccctgaacctatg-------tttctcatgttgctttagtctggcctagtacataa 592
Query: 2144 ttccaataatcaatcaaaactcatagtatgtgttaatacgtcaagtttattatggttgta 2203
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 ttcgaataatcaatcaaaactcatagtatgtgttaatacgtcaagtttattatggttgta 652
Query: 2204 acagtggatagtgtttccttaacccgtctcatgttattggtcgtacttgctgattgatac 2263
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 acagtggatagtgtttctttaacccgtctcatgttattggtcgtacttgctgattgatac 712
Query: 2264 ttttgtctgtcagttataacgccacattgaggagattctactgtaattgtggtatatttg 2323
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 ttttgtctgtcagttataatgccacattgaggagattctactgtaattgtggtatatttg 772
Query: 2324 ttaaacatgtaaatgtaagttttaattgat 2353
||||||||||||||||||||||||||||||
Sbjct: 773 ttaaacatgtaaatgtaagttttaattgat 802
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 332,177
Number of extensions: 15817
Number of successful extensions: 15817
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 15814
Number of HSP's successfully gapped: 2
Length of query: 2461
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2444
Effective length of database: 8,119,229
Effective search space: 19843395676
Effective search space used: 19843395676
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)