BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17355 (UTR included)
(3196 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01018A1G08 1409 0.0
>BF01018A1G08
Length = 760
Score = 1409 bits (711), Expect = 0.0
Identities = 747/760 (98%)
Strand = Plus / Plus
Query: 2147 gacactattttcaggcgcattctgtgagacttgcgagacttgtgagaacccgctctgtgc 2206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gacactattttcaggcgcattctgtgagacttgcgagacttgtgagaacccgctctgtgc 60
Query: 2207 gaatgcggaggcctgtgttctgtgccacttggacagcaattgcacagacgcatgttcaat 2266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 61 gaatgcggaggcctgtgttctgtgccacttggacagcaattgcacagacgcatgttccat 120
Query: 2267 tggcaatatgaattacactgtcagtgagagactgaatgaagtgaccaggaatagcgatga 2326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tggcaatatgaattacactgtcagtgagagactgaatgaagtgaccaggaatagcgatga 180
Query: 2327 tgcatcttgtattctgcgacgcgaggaagacggtctggaatgcgaataccaatatacata 2386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgcatcttgtattctgcgacgcgaggaagacggtctggaatgcgaataccaatatacata 240
Query: 2387 caaagctggcgtccaatctatgatagccatggaaatagtcataagggacaagctgtgcta 2446
|||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 241 caaagctggcgtccaatccatgatagccatggaaatagtcatcagggacaagctgtgcta 300
Query: 2447 ccaacccaccagtgctaaaataatgacgagctcgctgatcataatgggctgtgtcatact 2506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccaacccaccagtgctaaaataatgacgagctcgctgatcataatgggctgtgtcatact 360
Query: 2507 cgccggtttaatagtaatcatggcggtgaaaattgcccaggtcttgtccgatagacgagc 2566
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cgccggtctaatagtaatcatggcggtgaaaattgcccaggtcttgtccgatagacgagc 420
Query: 2567 atacgccaaatttttacaagaggcccaagaaagtaggaagaatatgcaagaattgaatcc 2626
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atacgccaaatttttacaagaagcccaagaaagtaggaagaatatgcaagaattgaatcc 480
Query: 2627 catatataaatcaccgatatctgaattcaagttaccagaatcctatccgagagaccgggc 2686
|||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||
Sbjct: 481 catatataaatcaccgatatctgagttcaagttaccggaatcctatccgagagatcgggc 540
Query: 2687 tgatttataggttatttttatttagttttaactgaattcgttttcattaaatagggaacg 2746
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 541 tgatttataggttatttttatttagttttaactgaattcgttttcattgaatagggaacg 600
Query: 2747 aattagagatatagaaatgtggcattatgtacttacctcaataatatagagtacaatttt 2806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aattagagatatagaaatgtggcattatgtacttacctcaataatatagagtacaatttt 660
Query: 2807 ctttgactaagattcttgattttcaagtgtataacttttgtaaataaaactttattaata 2866
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 661 ctttgactaagattcttgattttcaagtgtataactcttgtaaataaaactttattaata 720
Query: 2867 tttataatacccaatatataatgataatcaataaaaaata 2906
|||| |||||||||||||||||||||||||||||||||
Sbjct: 721 tttannntacccaatatataatgataatcaataaaaaata 760
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 377,109
Number of extensions: 8378
Number of successful extensions: 8378
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8378
Number of HSP's successfully gapped: 1
Length of query: 3196
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3178
Effective length of database: 8,109,745
Effective search space: 25772769610
Effective search space used: 25772769610
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)