BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17362 (UTR included)
(3862 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1374_C1 1388 0.0
>BF14_1374_C1
Length = 827
Score = 1388 bits (700), Expect = 0.0
Identities = 730/740 (98%)
Strand = Plus / Plus
Query: 478 tacagagtcgagtttaatgaaacatgacgaaggacagctacgagatgaacaatcgtctgt 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 tacagagtcgagtttaatgaaacatgacgaaggacagctacgagatgaacaatcgtctgt 147
Query: 538 ctcgaggcggctcgctgttcggcggcgatcctcaagtgcaactgcgaaccgcgctccgtt 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 ctcgaggcggctcgctgttcggcggcgatcctcaagtgcaactgcgaaccgcgctccgtt 207
Query: 598 ccaacgactacggaacattcaagaagctagtcagttacggtgccgtcgacctcgaacacg 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 ccaacgactacggaacattcaagaagctagtcagttacggtgccgtcgacctcgaacacg 267
Query: 658 tgtacccttaccccgactacaagacctgcctggaaatcgcagtttcagaaccaaataaaa 717
||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 tgtacccgtacccagactacaagacctgcctggaaatcgcagtttcagaaccaaataaaa 327
Query: 718 tagaattcatcaaactcttactccagcatgaggtccaagttaataaaatcaacgaaacac 777
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 tagaattcatcaaactcctactccagcatgaggtccaagttaataaaatcaacgaaacac 387
Query: 778 atggcggagcaccgatccatttcgctgttgagaacggtaacgctgaggctttagaagtac 837
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 388 atggcggagcaccgatccacttcgccgttgagaacggtaacgctgaggctttagaagtac 447
Query: 838 tcctagaagatgacagaatagatctggacacgaggtggaaaggcaacaccgcgctactga 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 tcctagaagatgacagaatagatctggacacgaggtggaaaggcaacaccgcgctactga 507
Query: 898 tggccatcaagcagatacaagatttagacgaagatcgtgaacacgacctggacatatatg 957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 tggccatcaagcagatacaagatttagacgaagatcgtgaacacgacctggacatatatg 567
Query: 958 aggatatggtagagaagcttctcaaagccggatgcaacgccaattccccagatctgagag 1017
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 568 aggatatggtagagaagcttctcaaagccggatgcaacgctaattccccagatctgagag 627
Query: 1018 gtataacacctgtatattcggcagctaagcaaggtctagagagggtcgtgaccctgatct 1077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 gtataacacctgtatattcggcagctaagcaaggtctagagagggtcgtgaccctgatct 687
Query: 1078 tagactattcaaaagatccaatcgatttagacacttataaagatataaaaggcaagacag 1137
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 tagactattcaaaagatccgatcgatttagacacttataaagatataaaaggcaagacag 747
Query: 1138 caaggtactatttgaaagaggcatttccacatttactgccaaaatttgattccgccgtag 1197
| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 748 cgaggtactatttgaaagaggcatttccacatttactgccaaaatttgactccgccgtag 807
Query: 1198 aaaacattgagcccagtatc 1217
||| ||||||||||||||||
Sbjct: 808 aaatcattgagcccagtatc 827
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 427,368
Number of extensions: 8081
Number of successful extensions: 8081
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8081
Number of HSP's successfully gapped: 1
Length of query: 3862
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3844
Effective length of database: 8,109,745
Effective search space: 31173859780
Effective search space used: 31173859780
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)