BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17367 (UTR included)
(1771 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01030B1G09 1140 0.0
BF01061B2E08 605 e-172
>BF01030B1G09
Length = 711
Score = 1140 bits (575), Expect = 0.0
Identities = 593/599 (98%)
Strand = Plus / Plus
Query: 226 tgttggagtcggctctattcgtattgatgtcgtacgctgccttccttatcgccgaagtct 285
|||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 10 tgttggagtcagctctattcgtattgatgtcgtacgctgccttccttattgccgaagtct 69
Query: 286 gcgaactaacaggtgtggtggctgtattgttctgtggtatctgccaagctcactacacct 345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 gcgaactaacaggtgtggtggctgtattgttctgtggtatctgccaagctcactacacct 129
Query: 346 acaacaatctctcctcggactctcgtaacagaaccaagcagctgtttgagttgttgaact 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 acaacaatctctcctcggactctcgtaacagaaccaagcagctgtttgagttgttgaact 189
Query: 406 tcctcgctgagaactttatattcacatacataggagtctcgatgttcacgttccctaaac 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 tcctcgctgagaactttatattcacatacataggagtctcgatgttcacgttccctaaac 249
Query: 466 atcacttcgatccctggttcattatagctggatttctaacttcgacactcggccgcgctg 525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 atcacttcgatccctggttcattatagctggatttctaacttcgacactcggccgcgctg 309
Query: 526 tcaacatctaccctctgtcatttctcctaaacctgggaaggaagccgcctataccagtga 585
|||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 310 tcaacatctaccctctgtcatttctcctaaacttggggaggaagccgcctataccagtga 369
Query: 586 actttcaacacatgctgttcttctctggtcttcgcggtgcgatgtcattcgcgctagcca 645
|||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 370 actttcaacacatgctcttcttctcgggtcttcgcggtgcgatgtcattcgcgctagcca 429
Query: 646 ttcgcaacacggtgtcggaggctcgtcaggcgatgttgacaaccacctctctgatagtga 705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ttcgcaacacggtgtcggaggctcgtcaggcgatgttgacaaccacctctctgatagtga 489
Query: 706 tcgccaccgtcgtactgcaaggaggagccgcctcacacgccctggcttacttgaggatac 765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 tcgccaccgtcgtactgcaaggaggagccgcctcacacgccctggcttacttgaggatac 549
Query: 766 ctactggtcaaggtcagaacgacgagaacgaagctctaccctaccgtgacgtcagaagt 824
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 ctactggtcaaggtcagaacgacgagaacgaagctctaccctaccgtgacgtcagaagt 608
Score = 196 bits (99), Expect = 8e-50
Identities = 102/103 (99%)
Strand = Plus / Plus
Query: 969 gatactccacatggtaacgagacgggtgagaaagcccgcctcgcacgtctatggggcgcg 1028
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 609 gatactccacatggtaacgagacgggtgagaaagctcgcctcgcacgtctatggggcgcg 668
Query: 1029 gtggactcaaagcttctgaagcccctactcacgcacgcccgac 1071
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 gtggactcaaagcttctgaagcccctactcacgcacgcccgac 711
>BF01061B2E08
Length = 783
Score = 605 bits (305), Expect = e-172
Identities = 305/305 (100%)
Strand = Plus / Plus
Query: 1467 taggaaatgtgtgccacaattatatataaagactattgaatcttagaactttttatttta 1526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taggaaatgtgtgccacaattatatataaagactattgaatcttagaactttttatttta 60
Query: 1527 atgtttctagctctttggttttagagtatagacttgtcagccatatggtctccctagaac 1586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atgtttctagctctttggttttagagtatagacttgtcagccatatggtctccctagaac 120
Query: 1587 agctttattcatattctgtttgaatttataattctttatagtttatatgaaaaaacacaa 1646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agctttattcatattctgtttgaatttataattctttatagtttatatgaaaaaacacaa 180
Query: 1647 aagtttgaataatattttcactgtatactttaaagtgaaactagttgtagattatcttca 1706
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aagtttgaataatattttcactgtatactttaaagtgaaactagttgtagattatcttca 240
Query: 1707 atgctattagtattataacttgaagtttatattcaatttcttaatgtttttattgatagc 1766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atgctattagtattataacttgaagtttatattcaatttcttaatgtttttattgatagc 300
Query: 1767 tattg 1771
|||||
Sbjct: 301 tattg 305
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 208,889
Number of extensions: 4431
Number of successful extensions: 4431
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4431
Number of HSP's successfully gapped: 3
Length of query: 1771
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1754
Effective length of database: 8,119,229
Effective search space: 14241127666
Effective search space used: 14241127666
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)