BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17370 (UTR included)
(2677 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01048A1B09 1257 0.0
>BF01048A1B09
Length = 711
Score = 1257 bits (634), Expect = 0.0
Identities = 687/706 (97%), Gaps = 6/706 (0%)
Strand = Plus / Plus
Query: 863 actcagctcaactttgtcaggacttttctgtgcttctttaaatttcatagaaagctttaa 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 12 actcagctcaactttgtcaggacttttctgtgcttctttaaatttcatagaaagcttcaa 71
Query: 923 tacaatatcacccaaaatggccctatggccaactggtgccactacaatgaagcaaaatgt 982
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 72 tacaatatcacccaaaatggccctgtggccaactggtgccactacaatgaagcaaaatgt 131
Query: 983 tacctcccacttgagatatgcttcattaccgagagaaattgtatgtactgaaaatttaac 1042
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 132 tacctcccacttgagatatgcttcattaccaagagaaattgtatgtactgaaaatttaac 191
Query: 1043 tccatggaagaaattgctgccatgcggatcaaatcatggatttgcatcactcttaaattc 1102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 tccatggaagaaattgctgccatgcggatcaaatcatggatttgcatcactcttaaattc 251
Query: 1103 aagaatgatacacaacacaaattatcattctatcggaatgcatgttagaagaatatgtga 1162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 aagaatgatacacaacacaaattatcattctatcggaatgcatgttagaagaatatgtga 311
Query: 1163 caaaaatgactgtttggaaacaaaacttgaagtcaaacagactgttgcgttagtttatga 1222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 caaaaatgactgtttggaaacaaaacttgaagtcaaacagactgttgcgttagtttatga 371
Query: 1223 ttttaaaataatatacagtagcgattggtcatttagaaaattatttggacaaggtttgcc 1282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ttttaaaataatatacagtagcgattggtcatttagaaaattatttggacaaggtttgcc 431
Query: 1283 aggagcatgccctttgtcatcatcgagcaaaatttatgttgatattacatctaataacac 1342
|||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 432 aggagcatgccctttgtcatcatcaagcaaaatttatgttgatataacatctaataacac 491
Query: 1343 atacgcatttaaacttagcccagaacctacaaataaaatattatcagtaagaggtggtag 1402
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 492 atacgcatttaaacttagcccagaacctacaaataaaatattatcagtgagaggtggtag 551
Query: 1403 cgacactgaactagcggtatatgagataaataataataatactgaaatgatgaacattgt 1462
|||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 552 cgacactgaactagcggtatatgagata------aataataccgaaatgatgaacattgt 605
Query: 1463 tgcaaaatatgaaagtccatataaaattactgtgaagaattcaccgccagtgacattcaa 1522
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 606 tgcaaaatatgaaagtccatacaaaattactgtgaagaattcaccgccagtgacattcaa 665
Query: 1523 tagatatgtcttaggctatggcaaagagtttggtggtattgtaaca 1568
|||||||||||| |||||| |||||||||||||| |||||||||
Sbjct: 666 tagatatgtcttnnnctatggtaaagagtttggtgggattgtaaca 711
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 416,604
Number of extensions: 14462
Number of successful extensions: 14462
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 14462
Number of HSP's successfully gapped: 2
Length of query: 2677
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2660
Effective length of database: 8,119,229
Effective search space: 21597149140
Effective search space used: 21597149140
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)