BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17383 (UTR included)
(1708 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1013_C1 1063 0.0
BF01029B1H05 391 e-108
BF01026B2E05 80 1e-14
>BF14_1013_C1
Length = 1412
Score = 1063 bits (536), Expect = 0.0
Identities = 536/536 (100%)
Strand = Plus / Minus
Query: 1173 tttattggtgaaaacatgaaaaatataatagattaatggctgataaaatgcagcaagaat 1232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1317 tttattggtgaaaacatgaaaaatataatagattaatggctgataaaatgcagcaagaat 1258
Query: 1233 gttacaatatttgtccatcacaaaactattttgctaataaatgcttgaaatattctgaat 1292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1257 gttacaatatttgtccatcacaaaactattttgctaataaatgcttgaaatattctgaat 1198
Query: 1293 gctatttgtaaatcagtaacgggcacaacaaaatggttaatgtcaatacataagattcgc 1352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1197 gctatttgtaaatcagtaacgggcacaacaaaatggttaatgtcaatacataagattcgc 1138
Query: 1353 tttggtaatatttaagttgaggacatcacaaaaaccacataaaagacactaacaagtttt 1412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1137 tttggtaatatttaagttgaggacatcacaaaaaccacataaaagacactaacaagtttt 1078
Query: 1413 ttgtgccctggattgatacagccattacatttcgcgggattaatataattaatatgaaag 1472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1077 ttgtgccctggattgatacagccattacatttcgcgggattaatataattaatatgaaag 1018
Query: 1473 tctaatttcataggttttcgggcgttatgttaacaattataataactaaatgaatatttt 1532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1017 tctaatttcataggttttcgggcgttatgttaacaattataataactaaatgaatatttt 958
Query: 1533 caaaaattcaccatcatggtaatccatttcactgcggacatgcggcgaaaggaatgttat 1592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 957 caaaaattcaccatcatggtaatccatttcactgcggacatgcggcgaaaggaatgttat 898
Query: 1593 attgtgggggccgaccgggctgttgtctctattcaataaaggaaaacacttttaacttaa 1652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897 attgtgggggccgaccgggctgttgtctctattcaataaaggaaaacacttttaacttaa 838
Query: 1653 gaaaccgtaattttaataacttaagttataaatatttatattcatcaggtcagctc 1708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 gaaaccgtaattttaataacttaagttataaatatttatattcatcaggtcagctc 782
>BF01029B1H05
Length = 544
Score = 391 bits (197), Expect = e-108
Identities = 272/297 (91%)
Strand = Plus / Plus
Query: 1173 tttattggtgaaaacatgaaaaatataatagattaatggctgataaaatgcagcaagaat 1232
|||||||| |||||| |||||||||||||| |||||||||||| ||||||| ||||||||
Sbjct: 248 tttattggggaaaacctgaaaaatataataaattaatggctgaaaaaatgccgcaagaat 307
Query: 1233 gttacaatatttgtccatcacaaaactattttgctaataaatgcttgaaatattctgaat 1292
|||||||||||||||| || ||||||||||||||||| |||||||||||| |||| |||
Sbjct: 308 gttacaatatttgtccctcccaaaactattttgctaaaaaatgcttgaaaaattccgaaa 367
Query: 1293 gctatttgtaaatcagtaacgggcacaacaaaatggttaatgtcaatacataagattcgc 1352
|||||||| ||||||| ||||||||||||||||||||||||| |||||||||| |||| |
Sbjct: 368 gctatttggaaatcagaaacgggcacaacaaaatggttaatggcaatacataaaattccc 427
Query: 1353 tttggtaatatttaagttgaggacatcacaaaaaccacataaaagacactaacaagtttt 1412
||||| |||||||||||||||||| || |||||||| | ||||| || ||||||||||||
Sbjct: 428 tttgggaatatttaagttgaggacctcccaaaaaccccctaaaaaaccctaacaagtttt 487
Query: 1413 ttgtgccctggattgatacagccattacatttcgcgggattaatataattaatatga 1469
|||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 488 ttgtgccctggattgatacaccccttacatttcgcgggattaatataattaatatga 544
>BF01026B2E05
Length = 346
Score = 79.8 bits (40), Expect = 1e-14
Identities = 46/48 (95%)
Strand = Plus / Plus
Query: 1661 aattttaataacttaagttataaatatttatattcatcaggtcagctc 1708
|||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 1 aattttaataacttaagttataaaaatttatattcatcagggcagctc 48
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 236,189
Number of extensions: 5269
Number of successful extensions: 5269
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 5269
Number of HSP's successfully gapped: 3
Length of query: 1708
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1691
Effective length of database: 8,119,229
Effective search space: 13729616239
Effective search space used: 13729616239
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)