BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17387 (UTR included)
(2194 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_30_C3 127 8e-29
BF01020B1H02 68 6e-11
>BF14_30_C3
Length = 994
Score = 127 bits (64), Expect = 8e-29
Identities = 70/72 (97%)
Strand = Plus / Minus
Query: 1 tggtaacaactagaaatatctttttaaaagctaactttgtgagaataatggactactgaa 60
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 73 tggtaacaactagaaatatctttttaaaagctaactttgtgagaataaacgactactgaa 14
Query: 61 aattgcacaagt 72
||||||||||||
Sbjct: 13 aattgcacaagt 2
>BF01020B1H02
Length = 734
Score = 67.9 bits (34), Expect = 6e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 1 tggtaacaactagaaatatctttttaaaagctaa 34
||||||||||||||||||||||||||||||||||
Sbjct: 306 tggtaacaactagaaatatctttttaaaagctaa 273
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 244,900
Number of extensions: 4926
Number of successful extensions: 4926
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4926
Number of HSP's successfully gapped: 2
Length of query: 2194
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2177
Effective length of database: 8,119,229
Effective search space: 17675561533
Effective search space used: 17675561533
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)