BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17413 (UTR included)
(1576 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01014A2A02 1019 0.0
>BF01014A2A02
Length = 766
Score = 1019 bits (514), Expect = 0.0
Identities = 554/569 (97%), Gaps = 15/569 (2%)
Strand = Plus / Plus
Query: 220 ggtacgaagtatgaaccacatagaattaatgaactcaaatgtgatgtaacacagtgaaga 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 ggtacgaagtatgaaccacatagaattaatgaactcaaatgtgatgtaacacagtgaaga 271
Query: 280 caaaatgaaaaacagtgaagagtgtttagactcataagagacattaatggaatcagtgtg 339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 caaaatgaaaaacagtgaagagtgtttagactcataagagacattaatggaatcagtgtg 331
Query: 340 atatt-attttataaaaaaaataatatatttaatatagatattgtgaatataatagacat 398
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 atatttattttataaaaaaaataatatatttaatatagatattgtgaatataatagacat 391
Query: 399 tgtaaatataaagtgcacaaagaatagtatagttgaaaccgctgtttacttcggacttcg 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tgtaaatataaagtgcacaaagaatagtatagttgaaaccgctgtttacttcggacttcg 451
Query: 459 tagcccgcggacaagatagaagcgacggtggcaattgcaggcatgggaatcaaagtcatg 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 tagcccgcggacaagatagaagcgacggtggcaattgcaggcatgggaatcaaagtcatg 511
Query: 519 atgaaagctttcaataagcctaaagacatcccatcacaggtgccgccgctcacgcccggc 578
||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 512 atgaaagctttcaataagcctaa--------------aggtgccgccgctcacgcccggc 557
Query: 579 accaacaagaagatggctgaggcgctgaaagctaccttcgcctcctgggagaaggaacag 638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 accaacaagaagatggctgaggcgctgaaagctaccttcgcctcctgggagaaggaacag 617
Query: 639 ttacgcctcggggtgcccaaagaccctcgtcagtggagtgaggcggctgttgctgcatgg 698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 ttacgcctcggggtgcccaaagaccctcgtcagtggagtgaggcggctgttgctgcatgg 677
Query: 699 ctccgttgggcggctcgtgagttctccctagaaggcgtagctctacagcagttcgcgcgt 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 ctccgttgggcggctcgtgagttctccctagaaggcgtagctctacagcagttcgcgcgt 737
Query: 759 gctcaaggcaaggatatatgcgcgatggg 787
|||||||||||||||||||||||||||||
Sbjct: 738 gctcaaggcaaggatatatgcgcgatggg 766
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 181,570
Number of extensions: 4192
Number of successful extensions: 4192
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4191
Number of HSP's successfully gapped: 2
Length of query: 1576
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1559
Effective length of database: 8,119,229
Effective search space: 12657878011
Effective search space used: 12657878011
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)