BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17417 (UTR included)
(2236 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01017A1G04 1588 0.0
BF14_927_C1 910 0.0
>BF01017A1G04
Length = 840
Score = 1588 bits (801), Expect = 0.0
Identities = 829/840 (98%)
Strand = Plus / Plus
Query: 416 caacctcatttcttaagaataagagaaaaatttttgcaaaatataattattgaatatttt 475
||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1 caacctcctttcttaagaataagagaaaaaattttgcaaaatataattattgaatatttt 60
Query: 476 tatttaataaataagaactcacaaaatgaaattaacaaaagtactatgtaggcagcatat 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tatttaataaataagaactcacaaaatgaaattaacaaaagtactatgtaggcagcatat 120
Query: 536 agattttatgttcaaaaggcattggatcattcaaggtaaacgtgtgccgataaatttggg 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agattttatgttcaaaaggcattggatcattcaaggtaaacgtgtgccgataaatttggg 180
Query: 596 tattgaacaatatctgaaggaaaaagggatcccagtgcaagatgccctagagtttgtaaa 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tattgaacaatatctgaaggaaaaagggatcccagtgcaagatgccctagagtttgtaaa 240
Query: 656 agaagaaccgccgcaacgagaaaaggtaaaaattattgggccctatgaaatgccattacc 715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agaagaaccgccgcaacgagaaaaggtaaaaattattgggccctatgaaatgccattacc 300
Query: 716 tctagacgaaaatcatcctaattataaagagagaccatgtctaaccttaaaacacacaaa 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tctagacgaaaatcatcctaattataaagagagaccatgtctaaccttaaaacacacaaa 360
Query: 776 tgtactcttagaaggtatttcacaagcacaagttctcactaaaagcataatatcggaaga 835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgtactcttagaaggtatttcacaagcacaagttctcactaaaagcataatatcggaaga 420
Query: 836 caaactacctcatagaatcgaagaactcgcagaattgccagcaccaaaatcggtacacga 895
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 421 caaactacctcatagaatcgaagaactcgcagaattgccagcaccaaaatcggttcacga 480
Query: 896 aggcgttaagaaagcaatacttaatgccaacatttttgattgtgaacagaaaaaactgcc 955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aggcgttaagaaagcaatacttaatgccaacatttttgattgtgaacagaaaaaactgcc 540
Query: 956 aaaaatcaaagatcctgaaaggccagcctataactttccacgcattttaggaataaccga 1015
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 541 aaaaatcaaagatcctgaaaggccagcttataactttccacgcattttaggaataaccga 600
Query: 1016 caaaaggaaaaatgaaatcctaacaaataaattgctgcatataatcgaaaagagcaatga 1075
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 601 caaaaggaaaaatgaaatcctaacaaataaactgctgcatataatcgaaaagagcaatga 660
Query: 1076 ttcggaggtcactctcagcaaatatgttgtgaatgatattgaagccagctgtgtatttga 1135
||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 661 ttcggnnntcactctcagcaaatatgtcgtgaatgatattgaagccagctgtgtatttga 720
Query: 1136 caaggacggtgatcttattcagttccaagatgtttctaatatcttagtaaccagcaacaa 1195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 caaggacggtgatcttattcagttccaagatgtttctaatatcttagtaaccagcaacaa 780
Query: 1196 acctctcaagcatgagctcaatgaagctgatgcctcatacattgatataccggacctgta 1255
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 acctctcaagcatgnnctcaatgaagctgatgcctcatacattgatataccggacctgta 840
>BF14_927_C1
Length = 1581
Score = 910 bits (459), Expect = 0.0
Identities = 478/483 (98%), Gaps = 1/483 (0%)
Strand = Plus / Minus
Query: 1612 acgtttggtatagcaagaacaacatgaagttatacgactccagcagatatctggacggtg 1671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1581 acgtttggtatagcaagaacaacatgaagttatacgactccagcagatatctggacggtg 1522
Query: 1672 cgcccgtgctagagaattacaaccctaaagtttacggatatataaatgccttttacaact 1731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1521 cgcccgtgctagagaattacaaccctaaagtttacggatatataaatgccttttacaact 1462
Query: 1732 gctaatgaagattaactttattatagtatagaataaaaaaaaacaataaataaatacaga 1791
|||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||
Sbjct: 1461 gctaatgaagattaactttattatagtatagaatttaaaaaaa-aatcaataaatacaga 1403
Query: 1792 tagtatagtatagtagtttcattcaagtcgtgaacagctgtagcgtatctaatgagaagt 1851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1402 tagtatagtatagtagtttcattcaagtcgtgaacagctgtagcgtatctaatgagaagt 1343
Query: 1852 attttattaaatgtattcatgtatatatcaaagtatatttacaagaacacaaatacattt 1911
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1342 attttattaaatgtattcatgtatatatcaaaatatatttacaagaacacaaatacattt 1283
Query: 1912 attattattattttttaaattagtatacaaggctggacttcgaaaacactttgtacatta 1971
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1282 attattattattttttaaattagtatacaaggctggacttcgaaaacactttgtacatta 1223
Query: 1972 taataatagcaataggtcgagggacacgaaagtttgttatatacggggggttcacttttc 2031
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1222 taataatagcaataggtcgagggacacgaaagtttgttatatacggggggttcacttttc 1163
Query: 2032 tgcactaaacttctgtaatctacgtcgcctgagctcttcagcgtcggcatcagatatttc 2091
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1162 tgcactaaacttctgtaatctacgtcgcctgagctcttcagcgtcggcatcagatatttc 1103
Query: 2092 cct 2094
|||
Sbjct: 1102 cct 1100
Score = 127 bits (64), Expect = 8e-29
Identities = 64/64 (100%)
Strand = Plus / Minus
Query: 2173 cctatttacactcgtctccatatcttcaaagtcgtgtctgctggatggtccaggtgtagc 2232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1102 cctatttacactcgtctccatatcttcaaagtcgtgtctgctggatggtccaggtgtagc 1043
Query: 2233 gatg 2236
||||
Sbjct: 1042 gatg 1039
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 319,357
Number of extensions: 8067
Number of successful extensions: 8067
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 8066
Number of HSP's successfully gapped: 3
Length of query: 2236
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2219
Effective length of database: 8,119,229
Effective search space: 18016569151
Effective search space used: 18016569151
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)