BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17425 (UTR included)
(4186 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01044A2A11 839 0.0
>BF01044A2A11
Length = 674
Score = 839 bits (423), Expect = 0.0
Identities = 455/468 (97%)
Strand = Plus / Plus
Query: 3310 gattcggtggtggttacgtggtgtcgtgtcgcgtccgtgaaggatcctcgttgtcgtcgt 3369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gattcggtggtggttacgtggtgtcgtgtcgcgtccgtgaaggatcctcgttgtcgtcgt 266
Query: 3370 ggcgtcgtgtcgtcgctcgttgtcctctcgccgtgctccgcgtgtctttaccgactgcat 3429
||||||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 267 ggcgtcgtgtcgtcgctnntnnnnntctcgccgtgctccgcgtgtctttaccgactgcat 326
Query: 3430 tacacttcctactgccgctacattctaatgtggacggtaaggaatctgagttgctcctca 3489
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 327 tacacttcctactgccgctacattctaatgtggacggtaaggagtctgagttgctcctca 386
Query: 3490 gcgacatctttcgtctcatgaacgaattacagaagagctgcgatattgatgactacaccg 3549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gcgacatctttcgtctcatgaacgaattacagaagagctgcgatattgatgactacaccg 446
Query: 3550 tcaaccagagctcactagaccagatgttcctaagtttcacggataaaaagagcatcgtag 3609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tcaaccagagctcactagaccagatgttcctaagtttcacggataaaaagagcatcgtag 506
Query: 3610 aacaagaagatgataacgacacgacgacgagacgacgacgacacagcgacgaactggact 3669
|||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct: 507 aacaagaagacgataacgacacgacgacgagacgacgaagacacagcgatgaactggact 566
Query: 3670 ccgtcaccgccttgtgatgctaggactaaatataaaatccgctcaccaaatatattgttt 3729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 ccgtcaccgccttgtgatgctaggactaaatataaaatccgctcaccaaatatattgttt 626
Query: 3730 gactaaatgttacttttgacgacagtgagtctatagagcggcttaaag 3777
||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 627 gactacatgttacttttgacgacagtgggtctatagagcggcttaaag 674
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 377,616
Number of extensions: 6911
Number of successful extensions: 6911
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6911
Number of HSP's successfully gapped: 2
Length of query: 4186
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4168
Effective length of database: 8,109,745
Effective search space: 33801417160
Effective search space used: 33801417160
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)