BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17434 (UTR included)
(2110 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01061A1A09 311 2e-84
BF01037A2B02 234 5e-61
>BF01061A1A09
Length = 586
Score = 311 bits (157), Expect = 2e-84
Identities = 185/195 (94%)
Strand = Plus / Minus
Query: 1408 aggaaactcgctggaagggcaataagtctcggaacatcggacaggattaccggctgatat 1467
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 214 aggaaactcgctggaagggcaataagtctcggaacatcggacagggttaccggctgatat 155
Query: 1468 acactgggtcgccttcaggtaaagctggtgtagcggtagtgctatctgaagagcttcgga 1527
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 acactgggtcgccatcaggtaaagctggtgtagcggtagtgctatctgaagagcttcgga 95
Query: 1528 atggttttcttgaagacgaccgtcgctgcaactgcctgatgcgggtgcgggtactgagcg 1587
||||| ||||||||| ||||||||||||| || || |||||||||||||||||||| ||
Sbjct: 94 atggtcttcttgaagtcgaccgtcgctgcgaccgcnngatgcgggtgcgggtactgatcg 35
Query: 1588 agggagtcattacta 1602
||||||| |||||||
Sbjct: 34 agggagtgattacta 20
>BF01037A2B02
Length = 742
Score = 234 bits (118), Expect = 5e-61
Identities = 124/126 (98%)
Strand = Plus / Plus
Query: 839 ctgcgtttgtccaccaggtcctcccgggccccccggcaagcgtggcaagaagggcaagaa 898
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 ctgcgtttgtccctcaggtcctcccgggccccccggcaagcgtggcaagaagggcaagaa 522
Query: 899 aggtgaccccggtgacccaggccccccggggttgatgggagctccggggaaaaatggatt 958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 aggtgaccccggtgacccaggccccccggggttgatgggagctccggggaaaaatggatt 582
Query: 959 cccggg 964
||||||
Sbjct: 583 cccggg 588
Score = 218 bits (110), Expect = 3e-56
Identities = 110/110 (100%)
Strand = Plus / Plus
Query: 998 gggccctataggactggacggacctaaaggagatccgggtcggccgggggacaagggaca 1057
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 gggccctataggactggacggacctaaaggagatccgggtcggccgggggacaagggaca 645
Query: 1058 aaaaggagaacatggcagtccaggctttgatgttttctctgcagtgaagg 1107
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 aaaaggagaacatggcagtccaggctttgatgttttctctgcagtgaagg 695
Score = 101 bits (51), Expect = 4e-21
Identities = 51/51 (100%)
Strand = Plus / Plus
Query: 1173 aaggccctgcaggcgacggggcacaacatctcagcgcagtccgtcatacag 1223
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 aaggccctgcaggcgacggggcacaacatctcagcgcagtccgtcatacag 742
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 178,387
Number of extensions: 3344
Number of successful extensions: 3344
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 3344
Number of HSP's successfully gapped: 4
Length of query: 2110
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2093
Effective length of database: 8,119,229
Effective search space: 16993546297
Effective search space used: 16993546297
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)