BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17435 (UTR included)
(3133 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1029_C1 664 0.0
>BF14_1029_C1
Length = 847
Score = 664 bits (335), Expect = 0.0
Identities = 335/335 (100%)
Strand = Plus / Plus
Query: 2304 ggagaacccggaccaggcggaaaacgcggccgtaagggtgacaaaggtgaccgtggggag 2363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ggagaacccggaccaggcggaaaacgcggccgtaagggtgacaaaggtgaccgtggggag 61
Query: 2364 caaggagttccgggactggacgcaccctgcccgctaggaccagacggactgccactgccg 2423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 caaggagttccgggactggacgcaccctgcccgctaggaccagacggactgccactgccg 121
Query: 2424 ggatgcggctggcgaccctcgaaggaagtggcgcgggaggagcggctgggaggaggaggt 2483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ggatgcggctggcgaccctcgaaggaagtggcgcgggaggagcggctgggaggaggaggt 181
Query: 2484 gacgggacgcgctcggaggacgacgcggaggaagaagatgcggagccagaagacgagggc 2543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gacgggacgcgctcggaggacgacgcggaggaagaagatgcggagccagaagacgagggc 241
Query: 2544 ggtgactatgaagggagagacgacctcgagccgccgagagactacgacgactacacagac 2603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ggtgactatgaagggagagacgacctcgagccgccgagagactacgacgactacacagac 301
Query: 2604 aacgcgcatcacgactcgcaccgggactgagcccg 2638
|||||||||||||||||||||||||||||||||||
Sbjct: 302 aacgcgcatcacgactcgcaccgggactgagcccg 336
Score = 466 bits (235), Expect = e-130
Identities = 251/256 (98%), Gaps = 4/256 (1%)
Strand = Plus / Plus
Query: 2882 gaagccatgttggcttggctgagacgacggctggagctggaagcggcggacaacgacctg 2941
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 gaagccatgttggcttggctgagacgacggctggagctggaagcggcggacaacgacctg 395
Query: 2942 actccctgacgacgactgcatttcaaactccttatacatatctcaacgtaccaacaatac 3001
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 actccctgacgacgactgcatttcaaactccttatacatatctcaacgtaccaacaatac 455
Query: 3002 gacccctatatacatgaatatg----tatgtgaagaaaacgaaagtttatacattgggca 3057
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 456 gacccctatatacatgaatatgtacatatgtgaagaaaacgaaagtttatacattgggca 515
Query: 3058 gggaacagtttataaaaataaacttataatcaaaattgttttcaactggagtatttcata 3117
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 cggaacagtttataaaaataaacttataatcaaaattgttttcaactggagtatttcata 575
Query: 3118 ataagttataatatca 3133
||||||||||||||||
Sbjct: 576 ataagttataatatca 591
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 216,028
Number of extensions: 3171
Number of successful extensions: 3171
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3170
Number of HSP's successfully gapped: 2
Length of query: 3133
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3115
Effective length of database: 8,109,745
Effective search space: 25261855675
Effective search space used: 25261855675
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)