BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17438 (UTR included)
(3523 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01021B2C10 1285 0.0
BF01043B1A07 1114 0.0
>BF01021B2C10
Length = 662
Score = 1285 bits (648), Expect = 0.0
Identities = 658/662 (99%)
Strand = Plus / Plus
Query: 939 aattttaacaaattgccacccggggaaatggcctatccttcgaacctacaactgtctttg 998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aattttaacaaattgccacccggggaaatggcctatccttcgaacctacaactgtctttg 60
Query: 999 aaccccaacaccaaagaggcgtacgtggtgttttccgacacaccgacctccagactagac 1058
||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aactcnnacaccaaagaggcgtacgtggtgttttccgacacaccgacctccagactagac 120
Query: 1059 gccaaggccgctcgcggtctggacactgtggcggcggtggccgggctcacgtcctccgct 1118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gccaaggccgctcgcggtctggacactgtggcggcggtggccgggctcacgtcctccgct 180
Query: 1119 gcgctgctgttcgtgtcgggtggactcgccgctcctctcgtggcgacctcgctggtcacc 1178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcgctgctgttcgtgtcgggtggactcgccgctcctctcgtggcgacctcgctggtcacc 240
Query: 1179 gccgggtggggcaccacgcgtgcgggctatcagatagcagagagagctgcgcacggggaa 1238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gccgggtggggcaccacgcgtgcgggctatcagatagcagagagagctgcgcacggggaa 300
Query: 1239 agcgtcaaccccttcactaactcagagtcgcggatgttatggctgggcgtggccgccagc 1298
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agcgtcaaccccttcactaactcagagtcgcggatgttatggctgggcgtggccgccagt 360
Query: 1299 ctcaccagcttcggggcaatgggagcctctatgagactgtcgtctctggcggcccgcggt 1358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctcaccagcttcggggcaatgggagcctctatgagactgtcgtctctggcggcccgcggt 420
Query: 1359 cgagagatatcgaatgctttcaagttggtcactgacatcgctaacggggcgaatgtcgcc 1418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cgagagatatcgaatgctttcaagttggtcactgacatcgctaacggggcgaatgtcgcc 480
Query: 1419 attagcgggttagcgattttaaacacttcgattttcatgtaccaacatcgggatgattta 1478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 attagcgggttagcgattttaaacacttcgattttcatgtaccaacatcgggatgattta 540
Query: 1479 acggctgtagatgttctgatgtacggcgcctctgtagcattttggtcgaaaggggtgtat 1538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 acggctgtagatgttctgatgtacggcgcctctgtagcattttggtcgaaaggggtgtat 600
Query: 1539 tcttacaaatcggcaaatacaataattaaagagtctcaaaactatgctttcgctcatatc 1598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tcttacaaatcggcaaatacaataattaaagagtctcaaaactatgctttcgctcatatc 660
Query: 1599 aa 1600
||
Sbjct: 661 aa 662
>BF01043B1A07
Length = 782
Score = 1114 bits (562), Expect = 0.0
Identities = 718/770 (93%)
Strand = Plus / Plus
Query: 586 acgaaccgcagctcattggaggtagtgactttttgaacacgataggtatcgctatgggtc 645
|||||||||||||||||||||||||||| |||||||||||||||||||| | |||||| |
Sbjct: 13 acgaaccgcagctcattggaggtagtgagtttttgaacacgataggtattgttatgggcc 72
Query: 646 tgccgaccagcgaccctgacaagtggacaaagtatgaaagagaaaaagcgtcaagaggag 705
||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 73 tgccgaccagcgaccctaacaagtggacaaagtatgaaagagaaaaagcatcaagaggag 132
Query: 706 aactcgtcttttacgaagggaaatctcgtgaagcgatcgatgtcgtggcaaaacaaataa 765
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 aactcgttttttacgaagggaaatctcgtgaagcgatcgatgtcgtggcaaaacaaataa 192
Query: 766 ggtcctactgtggaggagatgacaaaaattttattaccgttctcccaattgaactctact 825
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 193 ggtcctactgtggaggagatgacaaaatttttattaccgttctcccaattgaactctatt 252
Query: 826 acgaaggaaaactatacgaattaccgctctttagaatcaaacgctacaagaactcaaaga 885
| |||||||| ||||||||||||| ||||||||||||||||||||||| |||||||| |
Sbjct: 253 atgaaggaaagttatacgaattaccactctttagaatcaaacgctacaaaaactcaaaaa 312
Query: 886 tcttttacattgataacgtcggacgttgttacggtagttatgataactggtacaatttta 945
| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 tttattacattgataacgtcggacgttgttacggtagttatgataactggtacaatttta 372
Query: 946 acaaattgccacccggggaaatggcctatccttcgaacctacaactgtctttgaacccca 1005
||||||||||||| ||||| ||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 373 acaaattgccacctggggagatggcttatccttcgaaactacaactgtctttgaacccca 432
Query: 1006 acaccaaagaggcgtacgtggtgttttccgacacaccgacctccagactagacgccaagg 1065
||| ||||||||||| || |||||||||||||||||||||| ||||||||||||||||
Sbjct: 433 acatcaaagaggcgtctgtcatgttttccgacacaccgacctctagactagacgccaagg 492
Query: 1066 ccgctcgcggtctggacactgtggcggcggtggccgggctcacgtcctccgctgcgctgc 1125
||||||||||||||||||| ||||||||||||||||||||| | ||||||| |||||| |
Sbjct: 493 ccgctcgcggtctggacaccgtggcggcggtggccgggctcgcatcctccgttgcgctcc 552
Query: 1126 tgttcgtgtcgggtggactcgccgctcctctcgtggcgacctcgctggtcaccgccgggt 1185
||||||| ||||| ||||||||||||||||| || | |||||||||||||||||||||||
Sbjct: 553 tgttcgtatcgggcggactcgccgctcctcttgtagtgacctcgctggtcaccgccgggt 612
Query: 1186 ggggcaccacgcgtgcgggctatcagatagcagagagagctgcgcacggggaaagcgtca 1245
||||||||||||| || |||||||||||||| || ||||||||| |||||||||||| ||
Sbjct: 613 ggggcaccacgcgggctggctatcagatagcggaaagagctgcggacggggaaagcgaca 672
Query: 1246 accccttcactaactcagagtcgcggatgttatggctgggcgtggccgccagcctcacca 1305
|||| || ||||||||||| || ||||||||||||||||||||||||||||| |||||||
Sbjct: 673 acccattgactaactcagattctcggatgttatggctgggcgtggccgccagtctcacca 732
Query: 1306 gcttcggggcaatgggagcctctatgagactgtcgtctctggcggcccgc 1355
|||||||||| ||||||||||| |||||||| |||||| |||||||||||
Sbjct: 733 gcttcggggcgatgggagcctccatgagactatcgtctttggcggcccgc 782
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 342,423
Number of extensions: 6512
Number of successful extensions: 6512
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6512
Number of HSP's successfully gapped: 2
Length of query: 3523
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3505
Effective length of database: 8,109,745
Effective search space: 28424656225
Effective search space used: 28424656225
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)