BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17439 (UTR included)
(1993 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01032B1D07 1152 0.0
BF14_438_C1 882 0.0
BF01046B2H10 129 2e-29
>BF01032B1D07
Length = 609
Score = 1152 bits (581), Expect = 0.0
Identities = 587/589 (99%)
Strand = Plus / Plus
Query: 1119 gccgccaggatgaacgacgtggccgacgtggagaccgtgttcccggggctactgagggcc 1178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gccgccaggatgaacgacgtggccgacgtggagaccgtgttcccggggctactgagggcc 60
Query: 1179 accgtggagtggttcagattgtacaaggtgccggacgggaagcccgtcaaccagttcgcc 1238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 accgtggagtggttcagattgtacaaggtgccggacgggaagcccgtcaaccagttcgcc 120
Query: 1239 ttcgacggagaggccaaagacgccgccttcgcgcaccgcgtcgtggacgaggtgcacgag 1298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttcgacggagaggccaaagacgccgccttcgcgcaccgcgtcgtggacgaggtgcacgag 180
Query: 1299 ttttggaaggcgctggtggcgggggaggccgcggacgccagcgacatctgtaagatgaac 1358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttttggaaggcgctggtggcgggggaggccgcggacgccagcgacatctgtaagatgaac 240
Query: 1359 gtgtcggtcgcgaacagcgcggcgcgcgtggagcgcggggaggcggcgcgagtgttggcc 1418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtgtcggtcgcgaacagcgcggcgcgcgtggagcgcggggaggcggcgcgagtgttggcc 300
Query: 1419 ggagctccgccggcagctctacctcaggacataccagccagcgttgacaagtggcactac 1478
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggagctccgccggcagctctgcctcaggacataccagccagcgttgacaagtggcactac 360
Query: 1479 ttgtcgagtctctaaccatcgtcctcgtccagggtcaactcttcgtcggtcgcttgtggt 1538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttgtcgagtctctaaccatcgtcctcgtccagggtcaactcttcgtcggtcgcttgtggt 420
Query: 1539 tcaatcatataggatgtataggaaggattctctctaataatgacgccttgttatattgtt 1598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tcaatcatataggatgtataggaaggattctctctaataatgacgccttgttatattgtt 480
Query: 1599 gggataaaaaaaaataagggcaatgttagatttttcgtgttttcttattaagttatttaa 1658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gggataaaaaaaaataagggcaatgttagatttttcgtgttttcttattaagttatttaa 540
Query: 1659 aaaaaaatgcatcatttaactaaaaattaccttgaaatgcccccatctt 1707
||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 541 aaaaaaatgcatcatttaaataaaaattaccttgaaatgcccccatctt 589
>BF14_438_C1
Length = 622
Score = 882 bits (445), Expect = 0.0
Identities = 454/457 (99%)
Strand = Plus / Plus
Query: 1537 gttcaatcatataggatgtataggaaggattctctctaataatgacgccttgttatattg 1596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttcaatcatataggatgtataggaaggattctctctaataatgacgccttgttatattg 60
Query: 1597 ttgggataaaaaaaaataagggcaatgttagatttttcgtgttttcttattaagttattt 1656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgggataaaaaaaaataagggcaatgttagatttttcgtgttttcttattaagttattt 120
Query: 1657 aaaaaaaaatgcatcatttaactaaaaattaccttgaaatgcccccatcttcaacatgaa 1716
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaaaaaaaatgcatcatttaaataaaaattaccttgaaatgcccccatcttcaacatgaa 180
Query: 1717 aacattttttgttaaaatttatacaaaaagaaagataacaaaccagaaaaaagtaatgta 1776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aacattttttgttaaaatttatacaaaaagaaagataacaaaccagaaaaaagtaatgta 240
Query: 1777 tcaggaagtttttatcagatatagtgagttgttcaaatgtgagagattatagattgataa 1836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcaggaagtttttatcagatatagtgagttgttcaaatgtgagagattatagattgataa 300
Query: 1837 gcctaagttcaagtgtgatgattcagatattattatacatgttgttattatttaatgttt 1896
||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 301 gcctaagttcaagtgtgatgattcaaatattattatacatgttcttattatttaatgttt 360
Query: 1897 ttgttcgcctgcttgttgttgactcgctcctttaattactcgctccaatattaataaaat 1956
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttgttcgcctgcttgttgttgactcgctcctttaattactcgctccaatattaataaaat 420
Query: 1957 agtttggtgaaacgacgttgaatgcaaatatcagcgg 1993
|||||||||||||||||||||||||||||||||||||
Sbjct: 421 agtttggtgaaacgacgttgaatgcaaatatcagcgg 457
>BF01046B2H10
Length = 546
Score = 129 bits (65), Expect = 2e-29
Identities = 251/313 (80%)
Strand = Plus / Minus
Query: 1673 tttaactaaaaattaccttgaaatgcccccatcttcaacatgaaaacattttttgttaaa 1732
|||||||||||||| ||| |||| |||||| | ||||||| |||||||||||||||||||
Sbjct: 512 tttaactaaaaattccctggaaaggccccctttttcaacaggaaaacattttttgttaaa 453
Query: 1733 atttatacaaaaagaaagataacaaaccagaaaaaagtaatgtatcaggaagtttttatc 1792
||| | ||||||||| | | | | || |||||||||||||| || ||| |||||| ||
Sbjct: 452 ttttttccaaaaagaaggttccccaccccgaaaaaagtaatgtttcgggaggtttttttc 393
Query: 1793 agatatagtgagttgttcaaatgtgagagattatagattgataagcctaagttcaagtgt 1852
|| |||| | |||||||||||| | | |||| ||||||||||| |||||||||||| |
Sbjct: 392 cgaaatagggggttgttcaaatgggggggattttagattgataaccctaagttcaagggg 333
Query: 1853 gatgattcagatattattatacatgttgttattatttaatgtttttgttcgcctgcttgt 1912
| | |||| | || ||| | | ||| || ||||| |||||||||| || ||||||
Sbjct: 332 ggggtttcaaaattttttaccccgggggtttttttttaaagtttttgttcccccgcttgt 273
Query: 1913 tgttgactcgctcctttaattactcgctccaatattaataaaatagtttggtgaaacgac 1972
||| ||| | | ||||||||| | ||| |||| ||||| |||| ||||||| |||||| |
Sbjct: 272 tgtggacccccccctttaattccccgccccaaaattaaaaaaaaagtttggggaaacgcc 213
Query: 1973 gttgaatgcaaat 1985
||||||| |||||
Sbjct: 212 gttgaatccaaat 200
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 239,999
Number of extensions: 4712
Number of successful extensions: 4712
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 4711
Number of HSP's successfully gapped: 3
Length of query: 1993
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1976
Effective length of database: 8,119,229
Effective search space: 16043596504
Effective search space used: 16043596504
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)