BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17443 (UTR included)
(2452 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2902_C1 1366 0.0
>BF14_2902_C1
Length = 980
Score = 1366 bits (689), Expect = 0.0
Identities = 703/707 (99%), Gaps = 3/707 (0%)
Strand = Plus / Plus
Query: 732 gtctctctcaaccatctcgggccgtggctgggcggcaacggtgacggagacccgctcgac 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 gtctctctcaaccatctcgggccgtggctgggcggcaacggtgacggagacccgctcgac 336
Query: 792 cttaaggtctggaggaaccccatgtcgctcctccgcggcgccgagtacggccgactgtgg 851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 cttaaggtctggaggaaccccatgtcgctcctccgcggcgccgagtacggccgactgtgg 396
Query: 852 ggcgccgtccgccgcgcgccgctcacctactacgacatgaacctctccgcacaggagcat 911
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 ggcgccgtccgccgcgcgccgctcacctactacgacatgaacctctccgcacaggagcat 456
Query: 912 caagcgtggttctgtagtggcgcggggacgtccggcgtggacgagacgctggctcgagcg 971
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 caagcgtggttctgtagcggcgcggggacgtccggcgtggacgagacgctggctcgagcg 516
Query: 972 tggcgcgagcgagagccagctgcgcgggttgcgtgtgctcgcgccgctctcgcgctgagg 1031
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 tggcgcgagcgagagccagctgcgcgggttgcgtgtgctcgcgccgctctcgcgctgagg 576
Query: 1032 ccggactgcgcagccgccctgctgctgctggccgaggaagacgcgcccaccgtcctcgag 1091
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 ccggactgcgcagccgccctgctgctgctggccgaggaagacgcgcccaccgtcctcgag 636
Query: 1092 gctgagcgcgtcctgcggcgggcgtggcgtgcgggcgaggcgtcgtggcgctcgctggcg 1151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 gctgagcgcgtcctgcggcgggcgtggcgtgcgggcgaggcgtcgtggcgctcgctggcg 696
Query: 1152 gcggcagggtcggcggcggctgcggcgcggcgtgaagctgccgtgttagcgcacgtgaag 1211
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 697 gcggcagggtcggcggcg---gcggcgcggcgtgaagctgccgtgttagcgcacgtgaag 753
Query: 1212 cgccgcgccgccatgtgtgctcgccgcctcggtcgcctgcgagacgccgcccgcctcttc 1271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 cgccgcgccgccatgtgtgctcgccgcctcggtcgcctgcgagacgccgcccgcctcttc 813
Query: 1272 cgggagttggcgcgggacgctccgccggcgctgagttccctctcgttacacgagaacctc 1331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 814 cgggagttggcgcgggacgctccgccggcgctgagttccctctcgttacacgagaacctc 873
Query: 1332 atcgaggtactcctcgagcaaaaggcctacgccgacgtccaggctctcctcgctcgctac 1391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 874 atcgaggtactcctcgagcaaaaggcctacgccgacgtccaggctctcctcgctcgctac 933
Query: 1392 gacgacgcgtgtctgtctttgccgcgctccgcgaccgtctgctacac 1438
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 934 gacgacgcgtgtctgtctttgccgcgctccgcgaccgtctgctacac 980
Score = 545 bits (275), Expect = e-154
Identities = 275/275 (100%)
Strand = Plus / Plus
Query: 370 gtaatctgaaactttgtttttatgggaatatttgaatttgtgatgaaatcgataaatcat 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gtaatctgaaactttgtttttatgggaatatttgaatttgtgatgaaatcgataaatcat 61
Query: 430 gttgtgaatgcgtagacccattcggtgtggttctggtttgctaatatataaagtgtataa 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gttgtgaatgcgtagacccattcggtgtggttctggtttgctaatatataaagtgtataa 121
Query: 490 ggataattatgatgtgggatgcgtcatcgttcttaagctcgctcacgcctaagttttatg 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ggataattatgatgtgggatgcgtcatcgttcttaagctcgctcacgcctaagttttatg 181
Query: 550 tagctctgaccgggacttcgtcgctcatctccggcctcatccttattttcgagtggtggt 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tagctctgaccgggacttcgtcgctcatctccggcctcatccttattttcgagtggtggt 241
Query: 610 acttcaagaagtatggaacttctttcattgaacag 644
|||||||||||||||||||||||||||||||||||
Sbjct: 242 acttcaagaagtatggaacttctttcattgaacag 276
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 288,996
Number of extensions: 19358
Number of successful extensions: 19358
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 19357
Number of HSP's successfully gapped: 2
Length of query: 2452
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2435
Effective length of database: 8,119,229
Effective search space: 19770322615
Effective search space used: 19770322615
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)