BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17448 (UTR included)
(1282 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01062A1F03 240 5e-63
BF14_335_C2 131 3e-30
BF01058B2E08 127 5e-29
BF01016B1E06 92 3e-18
BF01017A1F03 82 2e-15
BF01047B2H03 76 2e-13
BF14_673_C1 74 6e-13
BF14_335_C5 74 6e-13
BF01055B2A04 70 9e-12
BF01021A2B11 70 9e-12
>BF01062A1F03
Length = 800
Score = 240 bits (121), Expect = 5e-63
Identities = 133/137 (97%)
Strand = Plus / Plus
Query: 561 tcaataaatttcgcggaactccaggaaaatatcaataagtggagtttgtctttggaggaa 620
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1 tcaataaatttcgcggaactccaagaaaatatcaataagtggagtttgtctttggaggag 60
Query: 621 caggagagggttttctacagacaagcgactacactcaacgcctgggacagactatcggcg 680
|||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 61 caggagagggttttctacagacaagcgactacgctcaacgcctgggacagactgtcggcg 120
Query: 681 agtaacggtgaaaaggt 697
|||||||||||||||||
Sbjct: 121 agtaacggtgaaaaggt 137
Score = 159 bits (80), Expect = 1e-38
Identities = 83/84 (98%)
Strand = Plus / Plus
Query: 693 aaggttggcaacgcatccgcaacatctcttatgttgcagatggccatgggcgacagtgac 752
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 614 aaggttggcaacgcatccgcaacatctcttatgttgcagatgtccatgggcgacagtgac 673
Query: 753 tcctgcccaagtagaccgtctgct 776
||||||||||||||||||||||||
Sbjct: 674 tcctgcccaagtagaccgtctgct 697
>BF14_335_C2
Length = 1827
Score = 131 bits (66), Expect = 3e-30
Identities = 140/163 (85%), Gaps = 5/163 (3%)
Strand = Plus / Minus
Query: 256 gagaggtataacggctaaatctctctacaacctgctaaga--cttggacctgtccagaac 313
|||||||||||| |||||||||||||||| ||| |||| | ||||| ||||||||||||
Sbjct: 1107 gagaggtataacagctaaatctctctacagcctactaaaatacttgggcctgtccagaac 1048
Query: 314 tcatatcaattaattcttggaacctacttcaaaggcagcgctagtaggttcttttcgaat 373
| | | || || |||||| |||| |||||| ||| |||| ||||||||||| |||| |||
Sbjct: 1047 taacaccagttcattcttcgaacgtacttcgaagacagctctagtaggttcgtttcaaat 988
Query: 374 ttggttagttagggagaggagcttggacggtggaggtgagcgt 416
|||||||| | ||||||||||||||||||||||||||||||
Sbjct: 987 ttggttag---gagagaggagcttggacggtggaggtgagcgt 948
Score = 109 bits (55), Expect = 1e-23
Identities = 91/103 (88%)
Strand = Plus / Minus
Query: 86 acatatttatgtattcgcgaattttaaagcgcgttgtgatgatagagcttacggttcctt 145
|||||||| |||||||||||||||||||||||| | | | ||||||| |||||||||||
Sbjct: 1277 acatatttctgtattcgcgaattttaaagcgcgctacgctaatagagcctacggttcctt 1218
Query: 146 gggaaaccaacatctccaaagaccataccatcaaggtcaacaa 188
|| | ||||||||| ||||| ||||| ||||||||||||||||
Sbjct: 1217 ggaagaccaacatccccaaaaaccatgccatcaaggtcaacaa 1175
>BF01058B2E08
Length = 761
Score = 127 bits (64), Expect = 5e-29
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 533 atcccaagcccctccagcggctataacttcaataaatttcgcggaactccaggaaaatat 592
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 694 atcccaagcccctccagcggctataacttcaataaatttcgcggaactccaagaaaatat 753
Query: 593 caataagt 600
||||||||
Sbjct: 754 caataagt 761
>BF01016B1E06
Length = 606
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 365 ttttcgaatttggttagttagggagaggagcttggacggtggaggtgagcgtgtaacgcg 424
||||| ||||||||||| ||| |||||||| ||||||||||||||||||||| |||||||
Sbjct: 324 ttttcaaatttggttaggtagagagaggagattggacggtggaggtgagcgtttaacgcg 265
Query: 425 ttagacaggg 434
||||| ||||
Sbjct: 264 ttagataggg 255
>BF01017A1F03
Length = 782
Score = 81.8 bits (41), Expect = 2e-15
Identities = 158/194 (81%), Gaps = 6/194 (3%)
Strand = Plus / Plus
Query: 236 tacgcggtagacgtgggagcgagaggtataacggctaaatctctc---tacaacctgcta 292
||||||||||| | ||||||||||| ||||||||||||||||||| || | | ||
Sbjct: 57 tacgcggtagaagcgggagcgagagatataacggctaaatctctcgtttagtaggttgta 116
Query: 293 agacttggacctgtccagaactcatatcaattaattcttggaacctacttcaaaggc--a 350
|||||| || ||||| |||| | ||||||| ||||||||||| |||||| ||||| |
Sbjct: 117 -gacttgagccagtccaaaactaacatcaattcattcttggaacgtacttccaaggcgca 175
Query: 351 gcgctagtaggttcttttcgaatttggttagttagggagaggagcttggacggtggaggt 410
|| |||||| || |||| || |||||||| ||| ||||||||||| |||||||||||
Sbjct: 176 gccctagtacattagtttctaagttggttagatagagagaggagcttccacggtggaggt 235
Query: 411 gagcgtgtaacgcg 424
|||||| |||||||
Sbjct: 236 gagcgtttaacgcg 249
>BF01047B2H03
Length = 758
Score = 75.8 bits (38), Expect = 2e-13
Identities = 67/74 (90%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 42 atacaaaatccccgaggatatttgtgcgtcggcctccagaccagacatattt-atgtatt 100
|||||||||||||||| ||||| ||| ||||| |||||||||||||||||| || ||||
Sbjct: 73 atacaaaatccccgagcatatt-gtgtgtcggtttccagaccagacatattttatatatt 15
Query: 101 cgcgaattttaaag 114
||||||||||||||
Sbjct: 14 cgcgaattttaaag 1
>BF14_673_C1
Length = 1197
Score = 73.8 bits (37), Expect = 6e-13
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 693 aaggttggcaacgcatccgcaacatctcttatgttgcagatggccatgggcgacagtgac 752
||||| |||||||||||||||||||| ||||||||||||||| |||| ||||| |||||
Sbjct: 1025 aaggtcggcaacgcatccgcaacatcccttatgttgcagatgtccataagcgacggtgac 966
Query: 753 t 753
|
Sbjct: 965 t 965
>BF14_335_C5
Length = 1597
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/52 (94%), Gaps = 2/52 (3%)
Strand = Plus / Plus
Query: 387 gagaggagcttggacggtggaggtgagcgtgtaa--cgcgttagacaggggc 436
|||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 1445 gagaggagcttggacggtggaggtgagcgtttaatgcgcgttagacaggggc 1496
>BF01055B2A04
Length = 830
Score = 69.9 bits (35), Expect = 9e-12
Identities = 104/126 (82%), Gaps = 2/126 (1%)
Strand = Plus / Minus
Query: 105 aattttaaagcgcgttgtgatgatagagcttacggttccttgggaaaccaacatctccaa 164
|||||| |||| |||||| | |||||||||||| |||| ||| ||||||||||| ||||
Sbjct: 563 aatttttaagctcgttgttttaatagagcttacgattccctggaaaaccaacatccccaa 504
Query: 165 agaccataccatcaaggtcaacaa--acgagctcacaaacgaactcactctaaataggtt 222
||||| | ||| | ||||||| || || ||||||| |||||||||||| ||||| ||
Sbjct: 503 agaccgtgccaccgaggtcaataagtacaagctcactaacgaactcactaggaatagatt 444
Query: 223 cgtcgt 228
||||||
Sbjct: 443 cgtcgt 438
>BF01021A2B11
Length = 729
Score = 69.9 bits (35), Expect = 9e-12
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 387 gagaggagcttggacggtggaggtgagcgtgtaacgcgt 425
|||||||||||||||||||||||||||||| ||||||||
Sbjct: 374 gagaggagcttggacggtggaggtgagcgtttaacgcgt 412
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 178,603
Number of extensions: 3557
Number of successful extensions: 3557
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 3549
Number of HSP's successfully gapped: 12
Length of query: 1282
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1265
Effective length of database: 8,119,229
Effective search space: 10270824685
Effective search space used: 10270824685
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)