BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17468 (UTR included)
(6673 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1754_C1 2472 0.0
>BF14_1754_C1
Length = 1332
Score = 2472 bits (1247), Expect = 0.0
Identities = 1317/1343 (98%), Gaps = 11/1343 (0%)
Strand = Plus / Plus
Query: 4899 aaatgggtcctgactgacaccattttatataatgccagacgaagcttcgtgaaccttatc 4958
|||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaatggctcttgactgacaccattttatataatgccagacgaagcttcgtgaaccttatc 60
Query: 4959 gtcaaagatattaatgataattcaccaaaattcaacggaaaggaaaatgatacaatttac 5018
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtcaaagatattaatgataattcaccaaaattcaacggaaaggaaaatgatacaatttac 120
Query: 5019 gtcggatatccgatgtccgaaatagaggggctcgttcttccacgtgctcttgctgaattg 5078
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcggatatccggtgtccgaaatagaggggctcgttcttccacgtgctcttgctgaattg 180
Query: 5079 aaggcgacagatgaggatataggagaaaatgcagctataatgtattggagcagggaagac 5138
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 181 aaggcgacagatgaggatataggagaaaatgcagctataatgtattggagcggggaagac 240
Query: 5139 aatctggccgtttcaccaaataccggtttagttcacgttcgcaataacgcaaaattggaa 5198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aatctggccgtttcaccaaataccggtttagttcacgttcgcaataacgcaaaattggaa 300
Query: 5199 aacaattcccgtttaacagtatatgctatcgaccaaaacggacaagggaacaacggctct 5258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aacaattcccgtttaacagtatatgctatcgaccaaaacggacaagggaacaacggctct 360
Query: 5259 atagttattgtggttaaattattaaataaaaaccaaattgccgtcctgactataagaaac 5318
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atagatattgtggttaaattattaaataaaaaccaaattgccgtcctgactataagaaac 420
Query: 5319 gcattcttggaggatgaatctaacgttttaaatgacttgagtaattcggtgggatacgac 5378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gcattcttggaggatgaatctaacgttttaaatgacttgagtaattcggtgggatacgac 480
Query: 5379 attaaggttttaaggtctattgtgatttctgatagctatgaagaatccaatagaacgaaa 5438
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 481 attaaggttttaaggtctattgtgatttctgatagctatgacgaatccaatagaacgaaa 540
Query: 5439 cgagacataaatagcaatagtggatcgtctctgcaactatatgtttatggtttaaaggaa 5498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cgagacataaatagcaatagtggatcgtctctgcaactatatgtttatggtttaaaggaa 600
Query: 5499 agtgaaccagtcgacatcaatcaattgaccggtgatattaacaataataacgtagctaca 5558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 agtgaaccagtcgacatcaatcaattgaccggtgatattaacaataataacgtagctaca 660
Query: 5559 atcaccatagccaggattctatctttagaagatcatcttgacagtctagcgatatgtccc 5618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 atcaccatagccaggattctatctttagaagatcatcttgacagtctagcgatatgtccc 720
Query: 5619 ggactggaacgtgatataggcctcctagctacgaccatcgcattatctatcctgatatta 5678
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 721 ggactggaacgtgatataggcctgctagctacaaccatcgcattatctatcctgatatta 780
Query: 5679 attttaattattgcgatatctgtcttgttcttccttaaatggagaataacaagaaactac 5738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 attttaattattgcgatatctgtcttgttcttccttaaatggagaataacaagaaactac 840
Query: 5739 gagagattcagtgatagcaacagtactacttcccagctagcatcacccaagcttcctgtt 5798
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 841 gagagattcagtgatagcaacagtactacttcccagctagcttcacccaagcttcctgtt 900
Query: 5799 attgaagttcctcagaaaacacgtctcaatatggaggaaataaaaaggagtgagaagaga 5858
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 901 attgaagttcctcagaaaacacgtctcaatatggaggaaataaaaaggagtgagaaaaga 960
Query: 5859 ctacaagaaatgttagaagaaccggtcgaaagtcaactcgattccgaaacagacgatatt 5918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 ctacaagaaatgttagaagaaccggtcgaaagtcaactcgattccgaaacagacgatatt 1020
Query: 5919 aaagatgtaaatgagactcttgatgaggccattgttaacatatcaagtgatgttcaatta 5978
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 aaagatgtaaatgagactcttgatgaggccattgttaacatatcaagtgatgttcaatta 1080
Query: 5979 cctattataatacaatcaatagataagctgaaagatggtaatgacgagtctgatgataat 6038
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 cctattataatacaatcaatagataagctgaaagatggtaatgacgagtctgatgataat 1140
Query: 6039 gacgaatatggtgaaatgaaacaaccgcggaaatctgttgtgacgttcaatgaaaacgtt 6098
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 gacgaatatggtgaaatgaaacaaccgcggaaatctgttgtgacgttcaatgaaaacgtt 1200
Query: 6099 gagaaaatcattcatatagaagacgttaatgaagatgaaagctcagagcagagttttgaa 6158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 gagaaaatcattcatatagaagacgttaatgaagatgaaagctcagagcagagttttgaa 1260
Query: 6159 gtttataaattttaataaaaattatatattaattatatatattttttttattttgctatt 6218
||||||||||||||||||| ||||||||| |||||| |||||||||||
Sbjct: 1261 gtttataaattttaataaannttatatatt-----------gttttttcattttgctatt 1309
Query: 6219 tattttatctacacacttattct 6241
|||||||||||||||||| ||||
Sbjct: 1310 tattttatctacacactttttct 1332
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 143,450
Number of extensions: 17889
Number of successful extensions: 17889
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 17889
Number of HSP's successfully gapped: 2
Length of query: 6673
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 6655
Effective length of database: 8,109,745
Effective search space: 53970352975
Effective search space used: 53970352975
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)