BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17476 (UTR included)
(1600 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1023_C1 1376 0.0
>BF14_1023_C1
Length = 873
Score = 1376 bits (694), Expect = 0.0
Identities = 700/702 (99%)
Strand = Plus / Plus
Query: 486 cagatatctgagagtatgctgacgaggctgctgacctttgctctggtggccgctagctgg 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 cagatatctgagagtatgctgacgaggctgctgacctttgctctggtggccgctagctgg 231
Query: 546 cgtgccgacgcctgcacatgcgagcccgaccatccacaaacacacttttgcaatagcgat 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 cgtgccgacgcctgcacatgcgagcccgaccatccacaaacacacttttgcaatagcgat 291
Query: 606 tttgtgatcgtgggacgggtacaaaaaatgttcagaggaacagatttctacgacgcttat 665
||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 292 tttgtgatcgtgggacgagtacaaaaaatgttcagaggaacagacttctacgacgcttat 351
Query: 666 aaggttaaaattcgaaatatattcaaagcaaccccgaaggccgcattagcgctgaaatcc 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 aaggttaaaattcgaaatatattcaaagcaaccccgaaggccgcattagcgctgaaatcc 411
Query: 726 ggcagaatcttgacgccttcacaagattcgctgtgcggaatggcacttcagcctagagag 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 ggcagaatcttgacgccttcacaagattcgctgtgcggaatggcacttcagcctagagag 471
Query: 786 acttatgttataacaggtcgtgtagtacatttgcaagcacacatacacctttgtggctac 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 acttatgttataacaggtcgtgtagtacatttgcaagcacacatacacctttgtggctac 531
Query: 846 gtaaataaatggcgtgaagtaacgccgcgacaacggaaaggtttcaggctgctttacaaa 905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 gtaaataaatggcgtgaagtaacgccgcgacaacggaaaggtttcaggctgctttacaaa 591
Query: 906 caaggctgcacgtgtaaggtccatgtgaaaagacgcagcacaaaatctcctaacacctgc 965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 caaggctgcacgtgtaaggtccatgtgaaaagacgcagcacaaaatctcctaacacctgc 651
Query: 966 gtgacgggttacgacgagtgctacgagcgacatggagtatgtcttcacgaccgcgaaaga 1025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 gtgacgggttacgacgagtgctacgagcgacatggagtatgtcttcacgaccgcgaaaga 711
Query: 1026 cgctgtcgctggactagggctccagccctcacaaggtgcctccagaagcaacacttcaac 1085
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 cgctgtcgctggactagggctccagccctcacaaggtgcctccagaagcaacacttcaac 771
Query: 1086 agcacgatgacttgattgaacaaacgacccgacgcattaaatattatatgtaacatttgt 1145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 agcacgatgacttgattgaacaaacgacccgacgcattaaatattatatgtaacatttgt 831
Query: 1146 atatcactcgactcgacttcattgaaattccggttaccttgt 1187
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 832 atatcactcgactcgacttcattgaaattccggttaccttgt 873
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 193,635
Number of extensions: 3889
Number of successful extensions: 3889
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3889
Number of HSP's successfully gapped: 1
Length of query: 1600
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1583
Effective length of database: 8,119,229
Effective search space: 12852739507
Effective search space used: 12852739507
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)