BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17479 (UTR included)
(3079 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01061B2E02 1223 0.0
BF01047A1F07 1138 0.0
BF01027B1F07 200 9e-51
>BF01061B2E02
Length = 859
Score = 1223 bits (617), Expect = 0.0
Identities = 629/633 (99%)
Strand = Plus / Plus
Query: 718 gggcggtcaaaatagatcgttcggggtgtcctggaatctgtggcccgcaggccgcgacca 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 gggcggtcaaaatagatcgttcggggtgtcctggaatctgtggcccgcaggccgcgacca 198
Query: 778 catcaaccctgtctttctcaagcttccgaaattcattcacctccaatgtcaattacctga 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 catcaaccctgtctttctcaagcttccgaaattcattcacctccaatgtcaattacctga 258
Query: 838 aaagaagctcagcggaggcgttacgcagattcagctcgggggacctgcagtcggagtgcg 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 aaagaagctcagcggaggcgttacgcagattcagctcgggggacctgcagtcggagtgcg 318
Query: 898 atgagggagaagtggatccttacacaggccgcccggccacaacgagccagcccaagccgc 957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 atgagggagaagtggatccttacacaggccgcccggccacaacgagccagcccaagccgc 378
Query: 958 aggctcagaggccggcctcccaggttacgggaggcagtatgggtagcggtgcgccgccag 1017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 aggctcagaggccggcctcccaggttacgggaggcagtatgggtagcggtgcgccgccag 438
Query: 1018 ctcctagctctggcaccgcttcagccggtggttcagatttatctttgaaccttcgcggtg 1077
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 cgcctagctctggcaccgcttcagccggtggttcagatttatctttgaaccttcgcggtg 498
Query: 1078 gctcacgaggaacctcagcaccctcctctccagcgaagtctcgtgaatcgctgctgcagc 1137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gctcacgaggaacctcagcaccctcctctccagcgaagtctcgtgaatcgctgctgcagc 558
Query: 1138 gtgtacaatctttaaccggagctgcccgagatcaaggagccaatttattagggagcgtga 1197
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 559 gtgtacaatctttaaccggcgctgcccgcgatcaaggagccaatttattagggagcgtga 618
Query: 1198 catcagtagcgtcagttggccgtggttacaacagggaccgatgtgtgacactgctggttg 1257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 catcagtagcgtcagttggccgtggttacaacagggaccgatgtgtgacactgctggttg 678
Query: 1258 tggatgaccagaatactgactggtccaaatatttccgtggacgacgactaccaggggaat 1317
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 679 tggatgaccagaatactgactggtccaaatatttccgtgggcgacgactaccaggggaat 738
Query: 1318 gggacatccgcgttgaacaggctgaattcaggg 1350
|||||||||||||||||||||||||||||||||
Sbjct: 739 gggacatccgcgttgaacaggctgaattcaggg 771
Score = 182 bits (92), Expect = 2e-45
Identities = 98/100 (98%)
Strand = Plus / Plus
Query: 619 cgcgtcccgtgctccacaatcatcactgccggatttatccttgctatctaatacgatctg 678
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 cgcgtcccgtgctccacaatcttcactgccggatttatcattgctatctaatacgatctg 60
Query: 679 catttccttggtcgccgtcgtgtcgtgctatcaattcccg 718
||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 catttccttggtcgccgtcgtgtcgtgctatcaattcccg 100
>BF01047A1F07
Length = 770
Score = 1138 bits (574), Expect = 0.0
Identities = 592/598 (98%)
Strand = Plus / Plus
Query: 2241 gtgcctcctcccgctccactcgccaccgcggccagcatcgaccgcccactgccgcccata 2300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37 gtgcctcctcccgctccactcgccaccgcggccagcatcgaccgcccactgccgcccata 96
Query: 2301 cccgcggagccaactcaaccaccaccacccccactcacacggagagattcacaagtttcc 2360
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 97 cccgcggagccaactcaaccaccaccacccccgctcacacggagagattcacaagtttcc 156
Query: 2361 caatcatcaacggtgtcgtctgcgtcggcggctcctagtacgaccagctcagcggcggga 2420
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 157 caatcatcaacggtgtcgtcttcgtcggcggctcctagtacgaccagctcagcggcggga 216
Query: 2421 actgcgacgggaactgcagctcccgcgggtgcaggtggtacgccctcccgcggaggcttc 2480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 gctgcgacgggaactgcagctcccgcgggtgcaggtggtacgccctcccgcggaggcttc 276
Query: 2481 gcccgtcagggctctcttagcgccgcactaacagaagacgcggaagacaccatgaagaac 2540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 gcccgtcagggctctcttagcgccgcactaacagaagacgcggaagacaccatgaagaac 336
Query: 2541 cttcgtaagaccttcgccggtatcttcggagacatgtaaccaaaaaacattaaaagcttt 2600
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 337 cttcgtaagaccttcgccggtattttcggagacatgtaaccaaaaaacattaaaagcttt 396
Query: 2601 cattgatattaccaattgaccctttgtcaaactaaagtggacctgtcaaacgtcagtttt 2660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 cattgatattaccaattgaccctttgtcaaactaaagtggacctgtcaaacgtcagtttt 456
Query: 2661 tttttattcgatgaacgatctagttagcagggagattagttaaaattactttatgatata 2720
||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 457 tttttattcgatgaacgatctaggtagcaggaagattagttaaaattactttatgatata 516
Query: 2721 agtagtccagccgtcatgtattgaaagcatacgtataagtacatggctaccaccaaataa 2780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 agtagtccagccgtcatgtattgaaagcatacgtataagtacatggctaccaccaaataa 576
Query: 2781 attttaaacaaatattaaaatatatataaaaattgttatatgtcatgaagtaatttta 2838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 attttaaacaaatattaaaatatatataaaaattgttatatgtcatgaagtaatttta 634
Score = 200 bits (101), Expect = 9e-51
Identities = 101/101 (100%)
Strand = Plus / Plus
Query: 2839 attaacattaattgcatcataaaatgtaataaaccacgttatcatttttattaacacaaa 2898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 attaacattaattgcatcataaaatgtaataaaccacgttatcatttttattaacacaaa 726
Query: 2899 gttaaaagtgaaatgaatcctataaataaacagagatttac 2939
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 gttaaaagtgaaatgaatcctataaataaacagagatttac 767
>BF01027B1F07
Length = 767
Score = 200 bits (101), Expect = 9e-51
Identities = 120/125 (96%), Gaps = 1/125 (0%)
Strand = Plus / Plus
Query: 2955 accattaagaaggagtcactgtttcgtttcatgtgttaaataaaaaaaaaaatcaaaacg 3014
||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||
Sbjct: 12 accattaagaaggagtcactgcttcgtttcatgtgttaaattaaaa-aaaaatcaaaacg 70
Query: 3015 aaatccaacgaatgcatttctaaatgattgccataaaatctcgatctatatacacaaaca 3074
|||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 71 aaatccaacgaatgcatttctaaatgcttgccataaaatcttgatctatatacacaaaca 130
Query: 3075 aactg 3079
|||||
Sbjct: 131 aactg 135
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 346,659
Number of extensions: 9327
Number of successful extensions: 9327
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 9326
Number of HSP's successfully gapped: 5
Length of query: 3079
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3061
Effective length of database: 8,109,745
Effective search space: 24823929445
Effective search space used: 24823929445
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)