BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17493 (UTR included)
(1327 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01035X1B05 460 e-129
>BF01035X1B05
Length = 770
Score = 460 bits (232), Expect = e-129
Identities = 288/308 (93%), Gaps = 9/308 (2%)
Strand = Plus / Plus
Query: 447 ggaatagaatttgattttatcccggacactaaagttgtcccactggttgctgatatgtct 506
|||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||
Sbjct: 444 ggaatagaatttgattttatcccggacactaaaggtgtgcctctggttgctgatatgtct 503
Query: 507 tccaattttatgtccaagaaaattgatgtttctaaatttggagtcatttacggcggtgct 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tccaattttatgtccaagaaaattgatgtttctaaatttggagtcatttacggcggtgct 563
Query: 567 caaaagaacataggtacttctggtgttgctctggttatagtgagggaagatcttttaaac 626
|||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct: 564 caaaagaacataggtacttctggtgttgctctggttatagtgcgggaagatctcttaaac 623
Query: 627 caggcgcttcccatttgcccctcaatattggattggaccatcaatgcgaaagcggattcc 686
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 caagcgcttcccatttgcccctcaatattggattggaccatcaatgcgaaagcggattcc 683
Query: 687 attcctgacacacctccgatgttt---------gttatgggacgactgttccaatggatc 737
|||| | ||||||| ||||||||| |||||||||||| || |||||||||||
Sbjct: 684 attcttaacacaccgccgatgtttgctatccaggttatgggacgagtgctccaatggatc 743
Query: 738 gacaggca 745
||||||||
Sbjct: 744 gacaggca 751
Score = 234 bits (118), Expect = 3e-61
Identities = 118/118 (100%)
Strand = Plus / Plus
Query: 158 aaatgtcccgaacaactacaaaatactatttctatctggcggcggtcagggacaatttgc 217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 aaatgtcccgaacaactacaaaatactatttctatctggcggcggtcagggacaatttgc 226
Query: 218 tgcggtgccactaaatttaatatcacgtactggttcagccgactatgtagtgactggt 275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 tgcggtgccactaaatttaatatcacgtactggttcagccgactatgtagtgactggt 284
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 140,925
Number of extensions: 2314
Number of successful extensions: 2314
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 2314
Number of HSP's successfully gapped: 2
Length of query: 1327
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1310
Effective length of database: 8,119,229
Effective search space: 10636189990
Effective search space used: 10636189990
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)