BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17520 (UTR included)
(3046 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01059B1B06 1481 0.0
>BF01059B1B06
Length = 786
Score = 1481 bits (747), Expect = 0.0
Identities = 779/789 (98%), Gaps = 3/789 (0%)
Strand = Plus / Plus
Query: 1395 atcgattacagcgagatcaatgattttagaatgaacgataacgaggtgccgagtgagcaa 1454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atcgattacagcgagatcaatgattttagaatgaacgataacgaggtgccgagtgagcaa 60
Query: 1455 gaaatgaaactaaaaaagctgagaggccagcgccgtatctcgcgatccctcctgtcgtac 1514
|||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 61 gaaatgaaactaaaaaagctgagaggtcagcgccgtatctcgcgatctctcctgtcgtac 120
Query: 1515 gaggacacgaccaccaggcgacaccacaggaagaagaagcacaagaagaagaacaagttc 1574
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaggacgcgaccaccaggcgacaccacaggaagaagaagcacaagaagaagaacaagttc 180
Query: 1575 atcctcaagctggtgaggaacgagacggaacacctggaggtggacgtgtactgcaaacac 1634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atcctcaagctggtgaggaacgagacggaacacctggaggtggacgtgtactgcaaacac 240
Query: 1635 gcgcggctctaccccaacaacagcttcgtgcgggacctggtcaccatcctcaacgacaaa 1694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcgcggctctaccccaacaacagcttcgtgcgggacctggtcaccatcctcaacgacaaa 300
Query: 1695 gacatcaaggtcatcaacaacggacgtgtcttcgaacggaacaaggtgtctgatgtcgtg 1754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gacatcaaggtcatcaacaacggacgtgtcttcgaacggaacaaggtgtctgatgtcgtg 360
Query: 1755 aaccgggagcactccgccgtgacactcaccaccgacaccgtcaacacccccgacaccccc 1814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aaccgggagcactccgccgtgacactcaccaccgacaccgtcaacacccccgacaccccc 420
Query: 1815 gatacccgcgacactcccgacaccttcaacccctacaccgccgacaccccgtcggactac 1874
|| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gacacccgcgacacccccgacaccttcaacccctacaccgccgacaccccgtcggactac 480
Query: 1875 cctcagacgaaacctctgaagaaacggaagcggaagaagcaccgaccggtggccgcgagc 1934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cctcagacgaaacctctgaagaaacggaagcggaagaagcaccgaccggtggccgcgagc 540
Query: 1935 ccggagctcggagacgccgccagcaacaaggaggaggagcaggctggagaccaggacgac 1994
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 541 ccggagctcggagacgccgccagcaacaaggaggagg---aggctggagaccaggacgac 597
Query: 1995 ctgaacaggcccggctccaagaagatcatcatagaagacttcgtggagatcaaacccatg 2054
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 ctgaacaggcccggctccaagaagatcatcatagaagacttcgtggagatcaaacccatg 657
Query: 2055 ggggccttggccaagcacctgaagaaacggaaacgggcgaaaaaaacccggagcacgacc 2114
|||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 658 ggggccctggccaagcacctgaagaaacggaaacgggcgaaaaaaaccaggagcacgacc 717
Query: 2115 ggcgcgccgcgggtgggcgactgggaggactccatgaggatggagagttcagctgacgac 2174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 ggcgcgccgcgggtgggcgactgggaggactccatgaggatggagagttcagctgacgac 777
Query: 2175 tcgcccatg 2183
|||||||||
Sbjct: 778 tcgcccatg 786
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 234,521
Number of extensions: 4168
Number of successful extensions: 4168
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4162
Number of HSP's successfully gapped: 1
Length of query: 3046
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3028
Effective length of database: 8,109,745
Effective search space: 24556307860
Effective search space used: 24556307860
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)