BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17529 (UTR included)
(2179 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_878_C1 1604 0.0
>BF14_878_C1
Length = 1023
Score = 1604 bits (809), Expect = 0.0
Identities = 868/884 (98%), Gaps = 4/884 (0%)
Strand = Plus / Plus
Query: 1297 ccgtgggcgggaaggttatagcagcgacgtcgtgtgagcgcgcttcgtcgcagccgctcc 1356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 ccgtgggcgggaaggttatagcagcgacgtcgtgtgagcgcgcttcgtcgcagccgctcc 63
Query: 1357 gccacttcggcagccagatcaagctagacctctccgtgctaccgataggcacgtccaaga 1416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 gccacttcggcagccagatcaagctagacctctccgtgctaccgataggcacgtccaaga 123
Query: 1417 ggaatcagaataaactgttgccaaacatgaagccacggaagccggtgataaaattcccga 1476
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 ggaaccagaataaactgttgccaaacatgaagccacggaagccggtgataaaattcccga 183
Query: 1477 gtatgtctgaagatacggagacggaatctatcccggggccgtcgagtcccaaaacaaaga 1536
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 184 gtatgtctgaagatacggagacggaatctatcccgggaccgtcgagtcccaaaacaaaga 243
Query: 1537 cacaatcaacactcgccaaaatacgcgggatcgctaacgagatacgccacctctcgaacc 1596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 cacaatcaacactcgccaaaatacgcgggatcgctaacgagatacgccacctctcgaacc 303
Query: 1597 tatccaagaatttcgacagcaagttaaagcgccctctgtcggactcggaggaagccgagg 1656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 tatccaagaatttcgacagcaagttaaagcgccctctgtcggactcggaggaagccgagg 363
Query: 1657 cgaagaaaatgaaaatggactgacgttagagaaaattaaatggattgattaattttaaaa 1716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 cgaagaaaatgaaaatggactgacgttagagaaaattaaatggattgattaattttaaaa 423
Query: 1717 taatgctcacaagttgtttgttcgtttgtattttgttgttggcaattgttcatggccgaa 1776
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 424 taatgctcacaagttgtttgttcgtttgtattttgttgtcggcaattgttcatggccgaa 483
Query: 1777 tgtcttacttcacattaagtattaatagttgtccgatgtgttcattctgtgttagtctgg 1836
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 tgtcttacttcacgttaagtattaatagttgtccgatgtgttcattctgtgttagtctgg 543
Query: 1837 ggcggcctcggagggggcggaggagtgggagttaatcaatacagtacagttggtgaccac 1896
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 ggcggcctcgga-ggggcggaggagtgggagttaatcaatacagtacagttggtgaccac 602
Query: 1897 agcggaatctgtttgtaatgacagccaaaggaacttacagagcaacataaagcgctttgt 1956
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 agcggaatctgtttgtaatgacagccaaaggaacttacagagcaacataaagcgctttgt 662
Query: 1957 gaattatttctcatgtacatgcatatgtacttatgtattttattagtgaagcatatacta 2016
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 663 gaattatttctcatgtacatgcatatgtacttatgtattttattagtgaagcatatatta 722
Query: 2017 atttacatatatttttaatatttatgccagtattcagtactttttgtatttgaaattcat 2076
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 723 atttacatatatttttaatatttatgctagtattcagtactttttgtatttgaaattcat 782
Query: 2077 cgagatcatagaaagaccttatttaattcctttgcaagggat-aagtttattcaacattt 2135
|||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |
Sbjct: 783 cgagatcatagaaagaccttatttaattcctttgcaagggataaattttattcaaca--t 840
Query: 2136 tctaaaccgcgtgttttttacaacaacaaacaaaaacacaattt 2179
|||||| |||||| ||||| ||||| |||||||||||||||||
Sbjct: 841 tctaaagtgcgtgtattttataacaataaacaaaaacacaattt 884
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 238,343
Number of extensions: 4544
Number of successful extensions: 4544
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4541
Number of HSP's successfully gapped: 1
Length of query: 2179
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2162
Effective length of database: 8,119,229
Effective search space: 17553773098
Effective search space used: 17553773098
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)