BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DPGLEAN17538 (UTR included)
         (1735 letters)

Database: est 
           9484 sequences; 8,280,457 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BF14_3046_C1                                                           84   9e-16
BF01049B2B11                                                           68   5e-11

>BF14_3046_C1
          Length = 1016

 Score = 83.8 bits (42), Expect = 9e-16
 Identities = 51/54 (94%)
 Strand = Plus / Plus

                                                                  
Query: 364  tccaactaataaaaacgttgatattggcaaaatattccaagattccagtgcgaa 417
            |||||| |||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 950  tccaacaaataaaaacgttgacattggcaaaatattccacgattccagtgcgaa 1003


>BF01049B2B11
          Length = 780

 Score = 67.9 bits (34), Expect = 5e-11
 Identities = 52/58 (89%)
 Strand = Plus / Plus

                                                                     
Query: 360 ttcatccaactaataaaaacgttgatattggcaaaatattccaagattccagtgcgaa 417
           |||||||||| ||||||||||| || ||| ||||||||||||| |||||||| |||||
Sbjct: 21  ttcatccaacaaataaaaacgtcgacattagcaaaatattccacgattccagagcgaa 78


  Database: est
    Posted date:  Jul 14, 2011  2:25 PM
  Number of letters in database: 8,280,457
  Number of sequences in database:  9484
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 303,163
Number of extensions: 6668
Number of successful extensions: 6668
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6668
Number of HSP's successfully gapped: 2
Length of query: 1735
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1718
Effective length of database: 8,119,229
Effective search space: 13948835422
Effective search space used: 13948835422
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)