BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17559 (UTR included)
(1528 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01025B2F02 1148 0.0
BF01023A2A12 159 2e-38
BF01056B1D02 125 2e-28
BF01052B1H02 111 3e-24
BF01031B1E12 80 1e-14
BF01010B2F09 80 1e-14
BF01029B2F12 68 4e-11
>BF01025B2F02
Length = 764
Score = 1148 bits (579), Expect = 0.0
Identities = 591/595 (99%)
Strand = Plus / Plus
Query: 474 tagtgcggttgaggcgagctcggcacaatggggaagctactgtcgaagatcttcggcaac 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 tagtgcggttgaggcgagctcggcacaatggggaagctactgtcgaagatcttcggcaac 183
Query: 534 aaggagatgaggatattgatgctgggtctggatgctgcggggaagactactattttatat 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 aaggagatgaggatattgatgctgggtctggatgctgcggggaagactactattttatat 243
Query: 594 aagttaaaattaggtcagtcagttacaacgataccaacagtcggtttcaatgttgaaact 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 aagttaaaattaggtcagtcagttacaacgataccaacagtcggtttcaatgttgaaact 303
Query: 654 gtaacgtataaaaatgtcaaattcaatgtatgggatgtcggaggacaggacaaaatacga 713
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 304 gtaacgtataaaaatgtcaaattcaatgtatgggatgttggaggacaggacaaaatacga 363
Query: 714 cctctgtggaggcattattacacaggcacccagggtttgatcttcgtggtggactgtgcg 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 cctctgtggaggcattattacacaggcacccagggtttgatcttcgtggtggactgtgcg 423
Query: 774 gaccgtgatcgtatagacgaggcacgccaggagttgcaccgcatcatcaacgacagggag 833
||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 424 gaccgtgatcgtatagacgaggcccgccaggagctgcaccgcatcatcaacgacagggag 483
Query: 834 atgagggacgccatcatactcatattcgctaacaagcaggacttgccagacgcaatgaaa 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 atgagggacgccatcatactcatattcgctaacaagcaggacttgccagacgcaatgaaa 543
Query: 894 ccccacgagatccaagagaagctgggtctgacacgcatcagggacaggaactggtacgtg 953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 ccccacgagatccaagagaagctgggtctgacacgcatcagggacaggaactggtacgtg 603
Query: 954 cagccgtcgtgcgccacatccggggacggactgtacgagggcctgacgtggctcaccacc 1013
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 604 cagccgtcgtgcgccacatccggggacggattgtacgagggcctgacgtggctcaccacc 663
Query: 1014 aaccacaagttatgagctgcggagtaggcggacagccgcctccatcacttacggt 1068
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 aaccacaagttatgagctgcggagtaggcggacagccgcctccatcacttacggt 718
Score = 91.7 bits (46), Expect = 3e-18
Identities = 48/49 (97%)
Strand = Plus / Plus
Query: 1362 ggtgaagaaaataacgatgccatgtaatgtaatatcgctgcgtaccatc 1410
||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 ggtgangaaaataacgatgccatgtaatgtaatatcgctgcgtaccatc 764
>BF01023A2A12
Length = 723
Score = 159 bits (80), Expect = 2e-38
Identities = 150/172 (87%), Gaps = 1/172 (0%)
Strand = Plus / Plus
Query: 26 atgtaatttctaagagtttttagacaccactgaccaacagtgaagaaaaacgtcgtgagg 85
||||| ||||||| ||| |||||||||||||||| || |||||| | ||||||||||||
Sbjct: 144 atgtactttctaacagtatttagacaccactgacggacggtgaaggagaacgtcgtgagg 203
Query: 86 aaaactggacttataatttccaattataactttgaaatcgccaatccgccttgagcaagc 145
||| |||| ||||||||||| |||||||| ||||||||| |||||| ||||||||| |||
Sbjct: 204 aaacctggtcttataatttcaaattataagtttgaaatcaccaatcagccttgagcgagc 263
Query: 146 atggtgatt-atgctctaaccttctccacgtgagaagcggtctttgcccagc 196
|||||||| |||||||||||||||||| |||| ||| || |||||| ||||
Sbjct: 264 gtggtgattaatgctctaaccttctccatgtgataagaggcctttgctcagc 315
>BF01056B1D02
Length = 778
Score = 125 bits (63), Expect = 2e-28
Identities = 146/171 (85%), Gaps = 7/171 (4%)
Strand = Plus / Plus
Query: 1 gtaccaatgtgatttttttcgaa--atatgtaatttctaagagtttttagacaccactga 58
||||||||||||| |||| ||| ||||||| |||||||| || ||||||||||||||
Sbjct: 522 gtaccaatgtgatcttttccgagtcatatgtactttctaagggtagttagacaccactga 581
Query: 59 ccaacagtgaagaaaaacgtcgtgaggaaaactggacttataatttccaattataacttt 118
| |||||| ||||||||||||||||| |||| ||||||||||| |||||||| ||
Sbjct: 582 cg----gtgaaggaaaacgtcgtgaggaaacctggtcttataatttcaaattataagatt 637
Query: 119 gaaatcgccaatccgccttgagcaagcatggtgatt-atgctctaaccttc 168
||||||||||| ||| ||||||||||| ||||| || ||||||||||||||
Sbjct: 638 gaaatcgccaacccgtcttgagcaagcgtggtggttaatgctctaaccttc 688
>BF01052B1H02
Length = 790
Score = 111 bits (56), Expect = 3e-24
Identities = 138/163 (84%), Gaps = 3/163 (1%)
Strand = Plus / Minus
Query: 13 tttttttcgaa--atatgtaatttctaagagtttttagacaccactgaccaacagtgaag 70
||||||||||| ||||| | ||| ||||||| ||||||||| |||||| || ||||||
Sbjct: 482 tttttttcgaatgatatgcactttttaagagtatttagacactactgacggacggtgaag 423
Query: 71 aaaaacgtcgtgaggaaaactggacttataatttccaattataactttgaaatcgccaat 130
||||| ||||||||||| |||| |||||||||| ||| || | ||||||||||||||
Sbjct: 422 gaaaacatcgtgaggaaacctggtcttataatttgaaataattagtttgaaatcgccaac 363
Query: 131 ccgccttgagcaagcatggtgatt-atgctctaaccttctcca 172
||| ||||||||||| ||||| || |||||||||| |||||||
Sbjct: 362 ccgtcttgagcaagcgtggtgcttaatgctctaactttctcca 320
>BF01031B1E12
Length = 730
Score = 79.8 bits (40), Expect = 1e-14
Identities = 96/112 (85%), Gaps = 2/112 (1%)
Strand = Plus / Plus
Query: 72 aaaacgtcgtgaggaaaactggacttataatttccaat-tataactttgaaatcgccaat 130
||||| ||||||||||| |||| ||||| ||| ||| ||||| |||||||||||||
Sbjct: 63 aaaacatcgtgaggaaacctggtcttatgattagcaaagtataagattgaaatcgccaac 122
Query: 131 ccgccttgagcaagcatggtgatt-atgctctaaccttctccacgtgagaag 181
||| ||||||||||| |||||||| ||||||||||||||||| ||||||||
Sbjct: 123 ccgtcttgagcaagcgtggtgattaatgctctaaccttctccgtgtgagaag 174
>BF01010B2F09
Length = 764
Score = 79.8 bits (40), Expect = 1e-14
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 107 aattataactttgaaatcgccaatccgccttgagcaagcatggtgatt-atgctctaacc 165
|||||||| || |||||||||||||| ||||||| ||| |||||||| |||||||||||
Sbjct: 379 aattataaaattaaaatcgccaatccgtcttgagcgagcgtggtgattaatgctctaacc 320
Query: 166 ttctccacgtgagaag 181
||||||| ||||||||
Sbjct: 319 ttctccatgtgagaag 304
>BF01029B2F12
Length = 749
Score = 67.9 bits (34), Expect = 4e-11
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 24 atatgtaatttctaagagtttttagacaccactgaccaacagtgaagaaaaacgtcgtga 83
||||||| ||||||||||| |||||||||||||||| || |||||| || || ||| ||
Sbjct: 620 atatgtactttctaagagtatttagacaccactgacggacggtgaaggaagacatcgcga 561
Query: 84 ggaaaactggacttataa 101
||||| |||| |||||||
Sbjct: 560 ggaaacctggtcttataa 543
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 186,442
Number of extensions: 3409
Number of successful extensions: 3409
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 3402
Number of HSP's successfully gapped: 8
Length of query: 1528
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1511
Effective length of database: 8,119,229
Effective search space: 12268155019
Effective search space used: 12268155019
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)