BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17577 (UTR included)
(7594 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019B1D02 1051 0.0
>BF01019B1D02
Length = 575
Score = 1051 bits (530), Expect = 0.0
Identities = 563/575 (97%)
Strand = Plus / Plus
Query: 3943 tgactgtcaactgcgccaagttcacgtgtctcctccacgtgtctctcgatccctacaaca 4002
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1 tgactgtcaactgcgccaagttcacctgtctcctccacgtgtctctcgatccctacaaca 60
Query: 4003 ccaccgaggaaatggaagtcacttggacggatctggtgctggattggaccaacggtaaac 4062
|||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 61 ccaccgaggaaatggaggtcacttggaccgatctggtgctggattggacgaacggtaaac 120
Query: 4063 tggggttcctgggtgagctgaaggtgtttgtgcgtacggctagcaagtatgacgactgtc 4122
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgggcttcctgggtgagctgaaggtgtttgtgcgtacggctagcaagtatgacgactgtc 180
Query: 4123 gcgtgttgcgcgtgcccgctctgcggctggccgtcaagttgggctggcaggtagtgggcg 4182
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 181 gcgtgttgcgcgtgcccgctctgcggctggccgtcaagttgggctggcaggtagtgggtg 240
Query: 4183 acgcgcgcgaccatcgcgccgtgacgccctgtgcgcccacgaggctgccggagtactcca 4242
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 241 acgcgcgcgaccatcgcgccgtgacgccctgcgcgcccacgaggctgccggagtactcca 300
Query: 4243 gcaatcaggagcatgactcgtaccgagcgttccggtctcagggcctagacctacacctga 4302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gcaatcaggagcatgactcgtaccgagcgttccggtctcagggcctagacctacacctga 360
Query: 4303 gtatggacacgaagccgatcgagggcgatgggcccgtgcttctgctgtacggcagcacgc 4362
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 361 gtatggacacgaagccgatcgagggcgacgggcccgtgcttctgctgtacggcagcacgc 420
Query: 4363 tgcgctggtttgaaagtctgaagctgatcttgtcgggcacgaccaggccaactcgccgcg 4422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgcgctggtttgaaagtctgaagctgatcttgtcgggcacgaccaggccaactcgccgcg 480
Query: 4423 gacgagccttcaacaacatgcgtccgcgccgtccccaactctccagacactacaggaacg 4482
|||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 481 gacgagccttcancaacatgcgtccgcgccnnccccaactctccagacactataggaacg 540
Query: 4483 tgtccgtatccctcacgctgcacaatctccaggtg 4517
|||||||||||||||||||||||||||||||||||
Sbjct: 541 tgtccgtatccctcacgctgcacaatctccaggtg 575
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 107,150
Number of extensions: 13159
Number of successful extensions: 13159
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 13159
Number of HSP's successfully gapped: 1
Length of query: 7594
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 7576
Effective length of database: 8,109,745
Effective search space: 61439428120
Effective search space used: 61439428120
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)