BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17581 (UTR included)
(1384 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01012A1E04 258 2e-68
BF01024A1H07 82 3e-15
BF01017A2H11 80 1e-14
BF01011A1H06 78 4e-14
BF14_729_C3 78 4e-14
BF01025A1D01 76 2e-13
BF01052B1F12 74 7e-13
BF14_729_C2 74 7e-13
BF01042A2B06 70 1e-11
>BF01012A1E04
Length = 841
Score = 258 bits (130), Expect = 2e-68
Identities = 206/228 (90%), Gaps = 5/228 (2%)
Strand = Plus / Minus
Query: 651 ccaacgctagatgaaataagtagtcaaataaagagaaaatcgtctaaatctgcaccggga 710
|||||||||||||| ||||||| ||| ||||||| |||||||||||||||||| ||||||
Sbjct: 484 ccaacgctagatgagataagtattcagataaagaaaaaatcgtctaaatctgcgccggga 425
Query: 711 cccgatggtatcctatatatagtctttaa-aaaatgtcactcggttcgtaaacgtctcat 769
||||||||||||| ||||||||||||||| |||||||| ||||||||||||| |||||
Sbjct: 424 cccgatggtatcccatatatagtctttaaaaaaatgtccatcggttcgtaaacatctcac 365
Query: 770 a-aaaaatacggtaaaatctggtcaaggaagcaaattccggagtgcttcgggaaagcaat 828
| | | ||||| |||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 364 atatatatacgataaaatctggtcaaggaagcaaatcccggagtgcttcgggaaagcaat 305
Query: 829 ttttgtcctcattccccaaaaaaaaaatcgagttactgatccgaaaga 876
|||||||||||||||| |||||| ||||||| || |||||||||||
Sbjct: 304 ttttgtcctcattccc---aaaaaagatcgagtcacagatccgaaaga 260
>BF01024A1H07
Length = 726
Score = 81.8 bits (41), Expect = 3e-15
Identities = 41/41 (100%)
Strand = Plus / Minus
Query: 961 gttacttttcagcaaccgtgatcacgggcagacgagatgta 1001
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 gttacttttcagcaaccgtgatcacgggcagacgagatgta 643
>BF01017A2H11
Length = 713
Score = 79.8 bits (40), Expect = 1e-14
Identities = 40/40 (100%)
Strand = Plus / Minus
Query: 961 gttacttttcagcaaccgtgatcacgggcagacgagatgt 1000
||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 gttacttttcagcaaccgtgatcacgggcagacgagatgt 30
>BF01011A1H06
Length = 739
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 961 gttacttttcagcaaccgtgatcacgggcagacgagatgtaaatgtctgtc 1011
|||||||||||| ||||||||||||||||||||||||||| | ||||||||
Sbjct: 496 gttacttttcagtaaccgtgatcacgggcagacgagatgtgagtgtctgtc 446
>BF14_729_C3
Length = 2041
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 961 gttacttttcagcaaccgtgatcacgggcagacgagatgtaaatgtctgtc 1011
|||||||| ||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 1624 gttactttgcagcaaccgtgatcacgggcagacgaggtgtgaatgtctgtc 1574
>BF01025A1D01
Length = 764
Score = 75.8 bits (38), Expect = 2e-13
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 961 gttacttttcagcaaccgtgatcacgggcagacgagat 998
||||||||||||||||||||||||||||||||||||||
Sbjct: 448 gttacttttcagcaaccgtgatcacgggcagacgagat 485
>BF01052B1F12
Length = 785
Score = 73.8 bits (37), Expect = 7e-13
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 964 acttttcagcaaccgtgatcacgggcagacgagatgt 1000
|||||||||||||||||||||||||||||||||||||
Sbjct: 411 acttttcagcaaccgtgatcacgggcagacgagatgt 447
>BF14_729_C2
Length = 1289
Score = 73.8 bits (37), Expect = 7e-13
Identities = 37/37 (100%)
Strand = Plus / Minus
Query: 961 gttacttttcagcaaccgtgatcacgggcagacgaga 997
|||||||||||||||||||||||||||||||||||||
Sbjct: 564 gttacttttcagcaaccgtgatcacgggcagacgaga 528
>BF01042A2B06
Length = 781
Score = 69.9 bits (35), Expect = 1e-11
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 1041 aaataataaaataacgaggagtaattcgaaaatattagtgtcatttaaataaatactcgc 1100
||||||| |||||||| | |||||| ||||||||||| | | ||||||| |||||||||
Sbjct: 294 aaataattaaataacgcgtagtaatccgaaaatattactttaatttaaacgaatactcgc 353
Query: 1101 gaaagtcttagatct 1115
||||||||| |||||
Sbjct: 354 gaaagtctttgatct 368
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 261,525
Number of extensions: 6981
Number of successful extensions: 6981
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 6978
Number of HSP's successfully gapped: 9
Length of query: 1384
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1367
Effective length of database: 8,119,229
Effective search space: 11098986043
Effective search space used: 11098986043
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)