BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17586 (UTR included)
(1327 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01050B2B03 942 0.0
>BF01050B2B03
Length = 696
Score = 942 bits (475), Expect = 0.0
Identities = 503/510 (98%), Gaps = 3/510 (0%)
Strand = Plus / Plus
Query: 566 aggttcaattccctccctaggcgccggaatcatttttggatctattttaggaattggagc 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 aggttcaattccctccctaggcgccggaatcatttttggatctattttaggaattggagc 217
Query: 626 ctatcagctttctcaagacccctcaaactactccctcatgctgggtactacagcgtctct 685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 ctatcagctttctcaagacccctcaaactactccctcatgctgggtactacagcgtctct 277
Query: 686 tggaggactcatgggatatagatactacaacagtagaaaatttatgcccgctggtttgat 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 tggaggactcatgggatatagatactacaacagtagaaaatttatgcccgctggtttgat 337
Query: 746 ggctgcaatgtctgctgggatgttggtcaagttattaataaagaatgtaaatgcccaccc 805
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 338 ggctgcaatgtctgctgggatgttggttaagttattaataaagaatgtaaatgcccaccc 397
Query: 806 attatcagttaaaaataactaataaggctaggtgtacatgttagtaatcatattactaaa 865
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 398 attatcagttaaaaataactaataaagctaggtgtacatgttagtaatcatattactaaa 457
Query: 866 cttataattccatattaagatgagtgtgacccatgtagacctagcctaagctcacagtga 925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 cttataattccatattaagatgagtgtgacccatgtagacctagcctaagctcacagtga 517
Query: 926 tgttttactgtatattacacag--ttttttttatagtttatttaataatatttataaaca 983
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 518 tgttttactgtatattacacagttttttttttatagtttatttaataatatttataaaca 577
Query: 984 ttacaaaattta-atttgtgttaaatgtgtcggtgttgggactgttgtaataaattaatg 1042
|||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 578 ttacaaaatttacttttgtgttaaatgtgttggtgttgggactgttgtaataaattaatg 637
Query: 1043 atggtagaaataaaaatcaattatcaagtt 1072
||||||||||||||||||||||||||||||
Sbjct: 638 atggtagaaataaaaatcaattatcaagtt 667
Score = 373 bits (188), Expect = e-103
Identities = 203/208 (97%)
Strand = Plus / Plus
Query: 361 gttataacttataattttgtactctgcagtttgagccttgcgccctttatttatatttat 420
||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 1 gttataacttataattttgtactttgcagtttgagcctttcgccctttatttatatttat 60
Query: 421 taaatatttaattgaaatataaaatgggagtcgatatccttggttttgcatatgctgcaa 480
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taaatatttaattggaatataaaatgggagtcgatatccttggttttgcatatgctgcaa 120
Query: 481 cagtagctgctggcggtattatgggttatgctaaagcaggttcaattccctccctgggcg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 121 cagtagctgctggcggtattatgggttatgctaaagcaggttcaattccctccctaggcg 180
Query: 541 ccggaatcatttttggatctatattagg 568
|||||||||||||||||||||| |||||
Sbjct: 181 ccggaatcatttttggatctattttagg 208
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 295,304
Number of extensions: 8111
Number of successful extensions: 8111
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8109
Number of HSP's successfully gapped: 2
Length of query: 1327
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1310
Effective length of database: 8,119,229
Effective search space: 10636189990
Effective search space used: 10636189990
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)