BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17598 (UTR included)
(1317 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01037A1A03 1277 0.0
>BF01037A1A03
Length = 815
Score = 1277 bits (644), Expect = 0.0
Identities = 653/656 (99%)
Strand = Plus / Plus
Query: 527 gaaagatacaagaagaacatgcaaatacggggtcagttgttatcagaagaaccctgagca 586
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 gaaagatacaagaagaacatgcaaatacggggtcatttgttatcagaagaaccctgagca 60
Query: 587 tcacaaacaatttaaacatccacctccctcaaagactaaaactggcaaaaaaggtaccaa 646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcacaaacaatttaaacatccacctccctcaaagactaaaactggcaaaaaaggtaccaa 120
Query: 647 caatcgctttgaaccttaccgtaaaacgaaaaataacaaacatgaagcaacaatacaaaa 706
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caatcgctttgaaccttaccgtaaaacgaaaaataacaaacatgaagcaacaatacaaaa 180
Query: 707 tgatgacgagagtactatttcagataatttagtaactgaaacattaggtgaagctaaaaa 766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgatgacgagagtactatttcagataatttagtaactgaaacattaggtgaagctaaaaa 240
Query: 767 actagaaggtatcgctaaaaacactttagacttgaaagataatataaattcagaggagaa 826
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 actagaaggtatcgctaaaaacactttagacttgaaagataatataaattcagaggagaa 300
Query: 827 acccaaaacaagtattgaaagaggccttgaagagagtaaggggggactcacatcagcatc 886
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acccaaaacaagtattgaaagaggccttgaagagagtaaggggggactcacatcagcatc 360
Query: 887 tgaagagattgatgatagtaaaaaatacctcatcaagtcagatagcatttcctattatga 946
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgaagagattgatgatagtaaaaaatacctcatcaagtcagatagcatttcctattatga 420
Query: 947 taaaaatgcagataaatcagtcatcaagaactgcttcttagttgatatgccagaagactt 1006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 taaaaatgcagataaatcagtcatcaagaactgcttcttagttgatatgccagaagactt 480
Query: 1007 ctattcattttatgaatttctttctgaaatggaatctattgaaaagttattgtctggtgt 1066
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctattccttttatgaatttctttctgaaatggaatctattgaaaagttattgtctggtgt 540
Query: 1067 taatctacaacttattggtccgtatgaattgtttttgggcaaattacctgtattggagga 1126
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 541 taatctacaacttattggtccgtatgaattgtttttgggcaaattacctatattggagga 600
Query: 1127 taaagacttatacttggtgcattggaggtttttttatgatgtccccgaatttcagg 1182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 taaagacttatacttggtgcattggaggtttttttatgatgtccccgaatttcagg 656
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 228,710
Number of extensions: 5675
Number of successful extensions: 5675
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5675
Number of HSP's successfully gapped: 1
Length of query: 1317
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1300
Effective length of database: 8,119,229
Effective search space: 10554997700
Effective search space used: 10554997700
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)