BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17602 (UTR included)
(3769 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_335_C4 86 5e-16
BF01019A1H08 82 7e-15
BF14_335_C2 74 2e-12
>BF14_335_C4
Length = 1491
Score = 85.7 bits (43), Expect = 5e-16
Identities = 92/107 (85%), Gaps = 1/107 (0%)
Strand = Plus / Minus
Query: 478 gagacgaaacttctcagcattccatgggttcaccatgcgggtgccagagccatcgcgttg 537
||||||||| |||||||||||||||| |||||| ||||| ||| | |||||||||||
Sbjct: 1364 gagacgaaaactctcagcattccatggattcaccgtgcggttgcggggaccatcgcgttg 1305
Query: 538 ca-gagaggagctttaacagtgcttgggatttgcgacgcagttgtag 583
|| ||||||||||| |||||||| ||||| ||||||| ||| |||||
Sbjct: 1304 caggagaggagcttcaacagtgcctgggacttgcgacccaggtgtag 1258
>BF01019A1H08
Length = 504
Score = 81.8 bits (41), Expect = 7e-15
Identities = 92/108 (85%), Gaps = 2/108 (1%)
Strand = Plus / Plus
Query: 478 gagacgaaacttctcagcattccatgggttcaccatgcgggtgccagagccatcgcgttg 537
|||| ||||| ||| ||||||| |||| |||||| |||||||||| | |||||||||||
Sbjct: 364 gagatgaaacctcttagcattcaatggattcaccgtgcgggtgccgggtccatcgcgttg 423
Query: 538 ca--gagaggagctttaacagtgcttgggatttgcgacgcagttgtag 583
|| ||||||||||| |||||||| ||||| ||||||| ||| |||||
Sbjct: 424 cagggagaggagcttcaacagtgcctgggagttgcgacccaggtgtag 471
>BF14_335_C2
Length = 1827
Score = 73.8 bits (37), Expect = 2e-12
Identities = 91/108 (84%), Gaps = 2/108 (1%)
Strand = Plus / Plus
Query: 478 gagacgaaacttctcagcattccatgggttcaccatgcgggtgccagagccatcgcgttg 537
|||||||||| ||| ||| ||| |||| |||||| |||||||||| | || |||||||
Sbjct: 808 gagacgaaacctcttagctttctatggattcaccgtgcgggtgccgggtccgccgcgttg 867
Query: 538 cag--agaggagctttaacagtgcttgggatttgcgacgcagttgtag 583
||| |||||||||| |||||||| ||||||||||||| ||| |||||
Sbjct: 868 cagggagaggagcttcaacagtgcctgggatttgcgacacaggtgtag 915
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 415,336
Number of extensions: 7596
Number of successful extensions: 7596
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 7594
Number of HSP's successfully gapped: 3
Length of query: 3769
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3751
Effective length of database: 8,109,745
Effective search space: 30419653495
Effective search space used: 30419653495
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)