BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17625 (UTR included)
(1417 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1H08 129 1e-29
BF01016B1E06 111 3e-24
BF01014B2F02 105 2e-22
BF14_335_C5 98 5e-20
BF14_335_C4 96 2e-19
BF14_335_C2 90 1e-17
BF01049B1F01 84 7e-16
BF01043B1E03 80 1e-14
BF01056B2D01 74 7e-13
BF01045B1A06 74 7e-13
BF01044B2F11 72 3e-12
BF01044B1A07 70 1e-11
BF01021A2B11 70 1e-11
BF01016A2B02 68 4e-11
>BF01019A1H08
Length = 504
Score = 129 bits (65), Expect = 1e-29
Identities = 86/92 (93%), Gaps = 2/92 (2%)
Strand = Plus / Minus
Query: 1325 tacacctgggtcgcaacttccaggcactgttgaagctcctctccctgcaatgc--tggac 1382
|||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||
Sbjct: 470 tacacctgggtcgcaactcccaggcactgttgaagctcctctccctgcaacgcgatggac 411
Query: 1383 ccggcacccgcttggtgaatccattgaatgct 1414
||||||||||| |||||||||||||||||||
Sbjct: 410 ccggcacccgcacggtgaatccattgaatgct 379
>BF01016B1E06
Length = 606
Score = 111 bits (56), Expect = 3e-24
Identities = 118/138 (85%), Gaps = 8/138 (5%)
Strand = Plus / Minus
Query: 1237 tttcagattttgttaggtagagagaggagcttggacggtggaggtgagcgtttaatgcat 1296
||||| |||| |||||||||||||||||| ||||||||||||||||||||||||| || |
Sbjct: 323 tttcaaatttggttaggtagagagaggagattggacggtggaggtgagcgtttaacgcgt 264
Query: 1297 cagataggggccccttaaaagtatatggtacacctgggtcgcaacttccaggcactgttg 1356
||||| |||||||||||| |||||||||||||| ||| || ||||||||||
Sbjct: 263 tagata-gggccccttaaa-------cctacacctgggtcgctactccccggcactgttg 212
Query: 1357 aagctcctctccctgcaa 1374
||||||||||| ||||||
Sbjct: 211 aagctcctctctctgcaa 194
>BF01014B2F02
Length = 623
Score = 105 bits (53), Expect = 2e-22
Identities = 83/93 (89%)
Strand = Plus / Minus
Query: 1325 tacacctgggtcgcaacttccaggcactgttgaagctcctctccctgcaatgctggaccc 1384
|||||||||||||||| | | |||| ||| |||||||||||||||||||| |||||||||
Sbjct: 623 tacacctgggtcgcaagtcctaggcgctgctgaagctcctctccctgcaacgctggaccc 564
Query: 1385 ggcacccgcttggtgaatccattgaatgctgag 1417
||||||||| |||| ||||| |||||||||||
Sbjct: 563 ggcacccgcacggtgcatccactgaatgctgag 531
>BF14_335_C5
Length = 1597
Score = 97.6 bits (49), Expect = 5e-20
Identities = 129/157 (82%), Gaps = 9/157 (5%)
Strand = Plus / Plus
Query: 1251 aggtagagagaggagcttggacggtggaggtgagcgtttaat--gcatcagataggggcc 1308
|||||||||||||||||||||||||||||||||||||||||| || | ||| ||||||
Sbjct: 1438 aggtagagagaggagcttggacggtggaggtgagcgtttaatgcgcgttagacaggggcg 1497
Query: 1309 ccttaaaagtatatggtacacctgggtcgcaacttccaggcactgttgaagctcctctcc 1368
||||||| ||||| |||||| | |||||||||||||||||||||||||
Sbjct: 1498 ccttaaa-------cctacacnnnnntcgcaagtcccaggcactgttgaagctcctctcc 1550
Query: 1369 ctgcaatgctggacccggcacccgcttggtgaatcca 1405
||||| | || ||||||||||||| ||||||||||
Sbjct: 1551 gtgcaaagatgcacccggcacccgcacggtgaatcca 1587
>BF14_335_C4
Length = 1491
Score = 95.6 bits (48), Expect = 2e-19
Identities = 152/184 (82%), Gaps = 12/184 (6%)
Strand = Plus / Plus
Query: 1238 ttcagattttgttaggtagagagaggagcttggacggtggaggtgagcgtttaatgca-- 1295
|||| |||| |||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 1177 ttcatatttggttaggtagagagaggagcttggaaagttgaggtgagcgtttaatgcgcg 1236
Query: 1296 tcagataggggccccttaaaagtatatggtacacctgggtcgcaacttccaggcactgtt 1355
| ||||| ||||||||||| || |||||||||||||| | ||||||||||||
Sbjct: 1237 taagataaaggccccttaaaccta-------cacctgggtcgcaagtcccaggcactgtt 1289
Query: 1356 gaagctcctctccctgcaatgc--tggacccggcacccgcttggtgaatccattgaatgc 1413
||||||||||| ||||||| || ||| ||| ||| |||| ||||||||||| ||||||
Sbjct: 1290 gaagctcctct-cctgcaacgcgatggtccccgcaaccgcacggtgaatccatggaatgc 1348
Query: 1414 tgag 1417
||||
Sbjct: 1349 tgag 1352
>BF14_335_C2
Length = 1827
Score = 89.7 bits (45), Expect = 1e-17
Identities = 75/84 (89%), Gaps = 2/84 (2%)
Strand = Plus / Minus
Query: 1325 tacacctgggtcgcaacttccaggcactgttgaagctcctctccctgcaatgc--tggac 1382
|||||||| ||||||| | ||||||||||||||||||||||||||||||| || ||||
Sbjct: 914 tacacctgtgtcgcaaatcccaggcactgttgaagctcctctccctgcaacgcggcggac 855
Query: 1383 ccggcacccgcttggtgaatccat 1406
||||||||||| |||||||||||
Sbjct: 854 ccggcacccgcacggtgaatccat 831
>BF01049B1F01
Length = 840
Score = 83.8 bits (42), Expect = 7e-16
Identities = 48/50 (96%)
Strand = Plus / Minus
Query: 1325 tacacctgggtcgcaacttccaggcactgttgaagctcctctccctgcaa 1374
|||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 638 tacacctgggtcgcaagtcccaggcactgttgaagctcctctccctgcaa 589
>BF01043B1E03
Length = 830
Score = 79.8 bits (40), Expect = 1e-14
Identities = 110/132 (83%), Gaps = 6/132 (4%)
Strand = Plus / Plus
Query: 1158 aaccttctaaaagacttgagcctgtccagaactgacatcaa----ttcttagaacatatt 1213
||||| || ||| ||||||||||| |||||||| ||||||| ||||| |||| || |
Sbjct: 239 aacctactgaaacacttgagcctgcccagaactaacatcaaatcattcttggaacgtact 298
Query: 1214 tcaaaggcagccctaatgggtcgtttcagattttgttaggtagagagaggagcttggacg 1273
||||||||| |||| || | |||||| |||| ||||||||||||||||| |||||||
Sbjct: 299 gcaaaggcaggccta--ggtttgtttcaaatttggttaggtagagagaggaccttggaca 356
Query: 1274 gtggaggtgagc 1285
||||||||||||
Sbjct: 357 gtggaggtgagc 368
>BF01056B2D01
Length = 728
Score = 73.8 bits (37), Expect = 7e-13
Identities = 67/76 (88%), Gaps = 2/76 (2%)
Strand = Plus / Minus
Query: 1344 ccaggcactgttgaagctcctctccctgcaa--tgctggacccggcacccgcttggtgaa 1401
|||||| |||||||||||||||||||||||| || |||||||||||||||| ||||||
Sbjct: 163 ccaggcgctgttgaagctcctctccctgcaatgtgatggacccggcacccgcacggtgaa 104
Query: 1402 tccattgaatgctgag 1417
| ||| ||||| ||||
Sbjct: 103 ttcatggaatgttgag 88
>BF01045B1A06
Length = 820
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/68 (89%), Gaps = 2/68 (2%)
Strand = Plus / Minus
Query: 1346 aggcactgttgaagctcctctccctgcaatgc--tggacccggcacccgcttggtgaatc 1403
||||||||||||||||||||||||||||| | ||||||| |||||||| |||||||||
Sbjct: 740 aggcactgttgaagctcctctccctgcaacacaatggaccccgcacccgcatggtgaatc 681
Query: 1404 cattgaat 1411
| ||||||
Sbjct: 680 ctttgaat 673
>BF01044B2F11
Length = 728
Score = 71.9 bits (36), Expect = 3e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 1248 gttaggtagagagaggagcttggacggtggaggtgagcgtttaatgcatcagataggggc 1307
||||| ||||||||||||||||||| ||||||||||||||||| || ||||||||||
Sbjct: 587 gttagatagagagaggagcttggacagtggaggtgagcgtttatcacagtagataggggc 646
Query: 1308 cccttaaa 1315
| ||||||
Sbjct: 647 cacttaaa 654
>BF01044B1A07
Length = 806
Score = 69.9 bits (35), Expect = 1e-11
Identities = 80/94 (85%), Gaps = 2/94 (2%)
Strand = Plus / Minus
Query: 1326 acacctgggtcgcaacttccaggcactgttgaagctcctctccctgcaatgc--tggacc 1383
|||||||| |||| | | |||| ||| |||||||||||||||||||| | || ||||||
Sbjct: 532 acacctggttcgcgagtcccagacacagttgaagctcctctccctgccacgcgatggacc 473
Query: 1384 cggcacccgcttggtgaatccattgaatgctgag 1417
|| ||||||| ||||||||||||||| ||||||
Sbjct: 472 cgccacccgcacggtgaatccattgaacgctgag 439
>BF01021A2B11
Length = 729
Score = 69.9 bits (35), Expect = 1e-11
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 1257 agagaggagcttggacggtggaggtgagcgtttaa 1291
|||||||||||||||||||||||||||||||||||
Sbjct: 373 agagaggagcttggacggtggaggtgagcgtttaa 407
>BF01016A2B02
Length = 780
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 1325 tacacctgggtcgcaacttccaggcactgttgaagctcctctccct 1370
|||||||| ||||||| | |||||||||||||||||||||||||||
Sbjct: 275 tacacctgagtcgcaattcccaggcactgttgaagctcctctccct 230
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 207,554
Number of extensions: 4862
Number of successful extensions: 4862
Number of sequences better than 1.0e-10: 14
Number of HSP's gapped: 4854
Number of HSP's successfully gapped: 17
Length of query: 1417
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1400
Effective length of database: 8,119,229
Effective search space: 11366920600
Effective search space used: 11366920600
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)