BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17627 (UTR included)
(3007 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01058B2F09 795 0.0
BF01055A2F12 793 0.0
BF01051A1C07 272 3e-72
>BF01058B2F09
Length = 637
Score = 795 bits (401), Expect = 0.0
Identities = 425/433 (98%)
Strand = Plus / Plus
Query: 862 agaacgcggcgtcgtcactgcgggaagctgataaatgggttgctctcgctcagtctctgg 921
|||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct: 205 agaatgcggcgtcgtcactgcgagaagctgataaatgggttgcgctcgctcagtctctgg 264
Query: 922 aagacaccctggactcaggagtgcccacaaacaaagagaaactagcgacactcgcggagc 981
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 265 aagacaccctggactcaggggtgcccacaaacaaagagaaactagcgacactcgcggaac 324
Query: 982 aagtgcacgctatgacgaccagcttggaggcactgagcgactctgcggagtatgagagca 1041
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aagtgcacgctatgacgaccagcttggaggcactgagcgactctgcggagtatgagagca 384
Query: 1042 agcgacttcagctaaccactctatacaacagactggaggcggccatcagtccgcctttca 1101
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 385 agcgacttcagctaaccactctatacaacagactggaggcggccatcagtccgcccttca 444
Query: 1102 tggaggctctgaccatgatggatgcagatcgctcgtcgtcctacgtgtccctgttcgtgt 1161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tggaggctctgaccatgatggatgcagatcgctcgtcgtcctacgtgtccctgttcgtgt 504
Query: 1162 cgatgtcccgcgtgtcgtcggcgctccgctgttggcgccgggcctccgccgccgcccgcg 1221
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 505 cgatgtcccgcgtgtcgtcggcgcttcgctgttggcgccgggcctccgccgccgcccgcg 564
Query: 1222 cctctcgctggacgagactcgcgactcacacgccgcgggccgccacacacctgctcatgg 1281
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cctctcgctggacgagactcacgactcacacgccgcgggccgccacacacctgctcatgg 624
Query: 1282 acgacgcccacgc 1294
|||||||||||||
Sbjct: 625 acgacgcccacgc 637
>BF01055A2F12
Length = 791
Score = 793 bits (400), Expect = 0.0
Identities = 400/400 (100%)
Strand = Plus / Plus
Query: 1126 cagatcgctcgtcgtcctacgtgtccctgttcgtgtcgatgtcccgcgtgtcgtcggcgc 1185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 cagatcgctcgtcgtcctacgtgtccctgttcgtgtcgatgtcccgcgtgtcgtcggcgc 451
Query: 1186 tccgctgttggcgccgggcctccgccgccgcccgcgcctctcgctggacgagactcgcga 1245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 tccgctgttggcgccgggcctccgccgccgcccgcgcctctcgctggacgagactcgcga 511
Query: 1246 ctcacacgccgcgggccgccacacacctgctcatggacgacgcccacgcccagatggagt 1305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 ctcacacgccgcgggccgccacacacctgctcatggacgacgcccacgcccagatggagt 571
Query: 1306 ggctggtgtcggtggtgagctgcgaggcgccgctggccgagctggtgcgcctccacaccg 1365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 ggctggtgtcggtggtgagctgcgaggcgccgctggccgagctggtgcgcctccacaccg 631
Query: 1366 acctgctgctgtccctcgacccctccatcactaagatagtgacggctcagttcaagctgt 1425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 acctgctgctgtccctcgacccctccatcactaagatagtgacggctcagttcaagctgt 691
Query: 1426 gccagacgcccgaggacggactcacctacctcacggacctccgggcggacctcgaccact 1485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 gccagacgcccgaggacggactcacctacctcacggacctccgggcggacctcgaccact 751
Query: 1486 accgggacagggtccgcgacttgctggactctcacaagta 1525
||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 accgggacagggtccgcgacttgctggactctcacaagta 791
Score = 577 bits (291), Expect = e-164
Identities = 309/315 (98%)
Strand = Plus / Plus
Query: 814 actccatcaagagtctacaaaagatagaccagctcaagactagactggagaacgcggcgt 873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 actccatcaagagtctacaaaagatagaccagctcaagactagactggagaacgcggcgt 60
Query: 874 cgtcactgcgggaagctgataaatgggttgctctcgctcagtctctggaagacaccctgg 933
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 61 cgtcactgcgggaagctgataaatgggttgcgctcgctcagtctctggaagacaccctgg 120
Query: 934 actcaggagtgcccacaaacaaagagaaactagcgacactcgcggagcaagtgcacgcta 993
||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 121 actcaggggtgcccacaaacaaagagaaactagcgacactcgcagaacaagtgcacgcta 180
Query: 994 tgacgaccagcttggaggcactgagcgactctgcggagtatgagagcaagcgacttcagc 1053
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgacgaccagcttggaggcactgagcgactctgcggagtatgagagcaagcgacttcagc 240
Query: 1054 taaccactctatacaacagactggaggcggccatcagtccgcctttcatggaggctctga 1113
|||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 241 taaccactttatacaacagactggaggcggccatcagtccgcccttcatggaggctctga 300
Query: 1114 ccatgatggatgcag 1128
|||||||||||||||
Sbjct: 301 ccatgatggatgcag 315
>BF01051A1C07
Length = 805
Score = 272 bits (137), Expect = 3e-72
Identities = 137/137 (100%)
Strand = Plus / Plus
Query: 1532 agaggtcgtgtctgaggcggctctgcgcgagctgggcgtgtctctgtacagtccgctgaa 1591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 agaggtcgtgtctgaggcggctctgcgcgagctgggcgtgtctctgtacagtccgctgaa 575
Query: 1592 ggcgctgctccctcagtacacggagctgcagacatcgctcctgctggcctcgctggacga 1651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 ggcgctgctccctcagtacacggagctgcagacatcgctcctgctggcctcgctggacga 635
Query: 1652 ccccgcgctacacacgg 1668
|||||||||||||||||
Sbjct: 636 ccccgcgctacacacgg 652
Score = 260 bits (131), Expect = 1e-68
Identities = 134/135 (99%)
Strand = Plus / Plus
Query: 1399 agatagtgacggctcagttcaagctgtgccagacgcccgaggacggactcacctacctca 1458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 agatagtgacggctcagttcaagctgtgccagacgcccgaggacggactcacctacctca 275
Query: 1459 cggacctccgggcggacctcgaccactaccgggacagggtccgcgacttgctggactctc 1518
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 cggacctccggtcggacctcgaccactaccgggacagggtccgcgacttgctggactctc 335
Query: 1519 acaagtataacaaag 1533
|||||||||||||||
Sbjct: 336 acaagtataacaaag 350
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 274,375
Number of extensions: 5412
Number of successful extensions: 5412
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 5412
Number of HSP's successfully gapped: 5
Length of query: 3007
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2989
Effective length of database: 8,109,745
Effective search space: 24240027805
Effective search space used: 24240027805
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)