BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17638 (UTR included)
(1378 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1301_C1 620 e-177
>BF14_1301_C1
Length = 1291
Score = 620 bits (313), Expect = e-177
Identities = 322/325 (99%)
Strand = Plus / Plus
Query: 432 tttgttgtaatcgtgtaaaattgtcggaattgctattaacagtggtgttctagaaatgta 491
||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 12 tttgttgtaatcgtgtaaaattgtccgaattgttattaacagtggtgttctagaaatgta 71
Query: 492 aatatcaaaatgtcgacattaattcaatcatatgaacaacagtattctattcttacggct 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 aatatcaaaatgtcgacattaattcaatcatatgaacaacagtattctattcttacggct 131
Query: 552 gaaattactgcaaaaatagggcgactgaagacagctcatgaagatgaccgtgatcaatta 611
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 132 gaaattactgcaaaaatagggcgacttaagacagctcatgaagatgaccgtgatcaatta 191
Query: 612 tcaagagagattcagtcaaatttcgaggaggccaatgatttgttggagcaattggaatta 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 tcaagagagattcagtcaaatttcgaggaggccaatgatttgttggagcaattggaatta 251
Query: 672 gaatctcgcggctccggtggagggtcaagagttccggcctaccgtgctgaactgcaacga 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 gaatctcgcggctccggtggagggtcaagagttccggcctaccgtgctgaactgcaacga 311
Query: 732 gtcagggatgagttcagatcagctg 756
|||||||||||||||||||||||||
Sbjct: 312 gtcagggatgagttcagatcagctg 336
Score = 535 bits (270), Expect = e-152
Identities = 273/274 (99%)
Strand = Plus / Plus
Query: 1105 caggaagtgaaggacgagccattggtccattttctggtatattggctgtatatagcatgc 1164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 caggaagtgaaggacgagccattggtccattttctggtatattggctgtatatagcatgc 800
Query: 1165 agcaaagtactgccttcgggccttcgggtctggtttgtgctacgatgtctgtgggccttt 1224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 agcaaagtactgccttcgggccttcgggtctggtttgtgctacgatgtctgtgggccttt 860
Query: 1225 ctctgccacaggtacgagagcctgagtggctaaagactatgtgactttatgcagctttag 1284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 ctctgccacaggtacgagagcctgagtggctaaagactatgtgactttatgcagctttag 920
Query: 1285 tgaatcggtttccccgttagctatccaattttagtaaaagtaaggaatattttatcaaat 1344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 921 tgaatcggtttccccgttagctatccaattttagtaaaagtaaggaatattttatcaaat 980
Query: 1345 cactccgataaggtcaagactcaagcggacttgg 1378
|||||||||||||||||||||||| |||||||||
Sbjct: 981 cactccgataaggtcaagactcaaccggacttgg 1014
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 195,550
Number of extensions: 5054
Number of successful extensions: 5054
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5054
Number of HSP's successfully gapped: 2
Length of query: 1378
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1361
Effective length of database: 8,119,229
Effective search space: 11050270669
Effective search space used: 11050270669
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)