BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17643 (UTR included)
(2752 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1948_C1 1427 0.0
>BF14_1948_C1
Length = 724
Score = 1427 bits (720), Expect = 0.0
Identities = 723/724 (99%)
Strand = Plus / Plus
Query: 376 gcaatctgttgtaaatttattattgtgaaatagttttgccatttttacgtaacgtaaata 435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcaatctgttgtaaatttattattgtgaaatagttttgccatttttacgtaacgtaaata 60
Query: 436 ttgtacatatttttaatatttattacaaagcctgtgatatagttaagttatatttatata 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgtacatatttttaatatttattacaaagcctgtgatatagttaagttatatttatata 120
Query: 496 aaaaaatgtcgaacccctggaaaaaagtaacagaacctactaatacacaaaacttagcag 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaaaaatgtcgaacccctggaaaaaagtaacagaacctactaatacacaaaacttagcag 180
Query: 556 atattatgtctgaacaatacgccagaggccttcagatcaaagaagagttacgttttgctg 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atattatgtctgaacaatacgccagaggccttcagatcaaagaagagttacgttttgctg 240
Query: 616 aacaaatatcagatctcaacttgagtacagaaaactcggaggtttctcccgaaattctcc 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aacaaatatcagatctcaacttgagtacagaaaactcggaggtttctcccgaaattctcc 300
Query: 676 gagaaattgaagaatcgagtgttaaggattattgcgactcggatgccattattgcgaaag 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gagaaattgaagaatcgagtgttaaggattattgcgactcggatgccattattgcgaaag 360
Query: 736 tgcttcagtgccaatatgacaaagcatatgacgatgagttaaaaatggttgaaaagaaga 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgcttcagtgccaatatgacaaagcatatgacgatgagttaaaaatggttgaaaagaaga 420
Query: 796 aaaatggtgaggcaaaagtatctgtatcttatgacaactatcgaaatattccggagcact 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaaatggtgaggcaaaagtatctgtatcttatgacaactatcgaaatattccggagcact 480
Query: 856 tgctgtacgactcagagtcagacgatgacgacaccgaaatgatgggcaacaaagattggg 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgctgtacgactcagagtcagacgatgacgacaccgaaatgatgggcaacaaagattggg 540
Query: 916 atcgttttgaaacaaacgaaaaagaattcgcgagcctaccgaaaagaggcttcatcatga 975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atcgttttgaaacaaacgaaaaagaattcgcgagcctaccgaaaagaggcttcatcatga 600
Query: 976 aagatggtgcaatggtcaccaagcacgatagtgttatcaatggcagaagaaatgcttgta 1035
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aagatggtgcaatggtcaccaagcacgatagtgttatcaatggcagaagaaatgcttgta 660
Query: 1036 aagttatggcatttccgcctgaagtctgcacaggggacggtgctgggtttgatatgaagc 1095
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aagttatggcatttccacctgaagtctgcacaggggacggtgctgggtttgatatgaagc 720
Query: 1096 tatc 1099
||||
Sbjct: 721 tatc 724
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 409,612
Number of extensions: 9585
Number of successful extensions: 9585
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9585
Number of HSP's successfully gapped: 1
Length of query: 2752
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2735
Effective length of database: 8,119,229
Effective search space: 22206091315
Effective search space used: 22206091315
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)