BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17644 (UTR included)
(3421 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01012A1B09 422 e-117
>BF01012A1B09
Length = 841
Score = 422 bits (213), Expect = e-117
Identities = 237/245 (96%)
Strand = Plus / Plus
Query: 3177 caaggaagagtcacaaaatagaaaaatacttctgcacatgtctagtcaggcgacacgagg 3236
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 18 caaggaagagtcacaaaatagaaaaatacttctgcacacgactagtcaggcgacacgagg 77
Query: 3237 cgagttagaactgctcaaggagccactgtagcaaatgatccttgccgtttaggaactctg 3296
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 cgagttagaactgctgaaggagccactgtagcaaatgatccttgccgtttaggaactctg 137
Query: 3297 tgttttgatcgcgtccgctcgccggaccaacgaactttcatttagataacacgtttttcc 3356
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 138 tgttttgatcgcctccgctcgctggaccaacgaactttcatttagataacacgtttttcc 197
Query: 3357 cattcttaccttatcagcgtttcccttttacgtttctgagtagtgtcactcttggcacat 3416
|||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 198 cattcttaccttatcagcgtttttcttttacgtttctgagtagtgtcacccttggcacat 257
Query: 3417 acatt 3421
|||||
Sbjct: 258 acatt 262
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 316,518
Number of extensions: 6148
Number of successful extensions: 6148
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6148
Number of HSP's successfully gapped: 1
Length of query: 3421
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3403
Effective length of database: 8,109,745
Effective search space: 27597462235
Effective search space used: 27597462235
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)