BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17645 (UTR included)
(4201 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01048A1G01 1285 0.0
BF14_1301_C1 254 1e-66
>BF01048A1G01
Length = 800
Score = 1285 bits (648), Expect = 0.0
Identities = 678/688 (98%)
Strand = Plus / Plus
Query: 2660 gtcagtgagatcggacggagatctggccaccacgcaaagtgactccgacgatttaagttc 2719
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtcagtgaaatcggacggagatctggccaccacgcaaagtgactccgacgatttaagttc 60
Query: 2720 agagcaaagacaatgccatataaatagtatgaagttattaccagagagatgttacagtca 2779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agagcaaagacaatgccatataaatagtatgaagttattaccagagagatgttacagtca 120
Query: 2780 aagcatgctgcacgcgcagaccgcttacgtcctggaatccccgaaggtctactccgacgt 2839
||||||||||||||| |||||||| || || |||||||||||||||||||||||||||||
Sbjct: 121 aagcatgctgcacgcacagaccgcgtatgttctggaatccccgaaggtctactccgacgt 180
Query: 2840 tttcaactacgacaccggcaacgaatcctgtgtaaatacttcattattcgaaaaattaga 2899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tttcaactacgacaccggcaacgaatcctgtgtaaatacttcattattcgaaaaattaga 240
Query: 2900 taatatggaatgcgtgcaaggagagagggtattcgtcactaccgtattagagagggacaa 2959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 taatatggaatgcgtgcaaggagagagggtattcgtcactaccgtattagagagggacaa 300
Query: 2960 aatgaatgccttaggtttgcaagttgccgaaggctctgatggtaatgtatacataaaatc 3019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aatgaatgccttaggtttgcaagttgccgaaggctctgatggtaatgtatacataaaatc 360
Query: 3020 tataacccccggaagttcggcggacagttgtggaaagcttttggcaggagatcaaatcat 3079
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 361 tataacccccggaagttcggcggacagttgtggaaaacttttggcaggagatcaaatcat 420
Query: 3080 atcagtgaatgggcaaactctacttaatctgaaatacgataaggctttaagtatgttaca 3139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atcagtgaatgggcaaactctacttaatctgaaatacgataaggctttaagtatgttaca 480
Query: 3140 gagcgctccagatagggtagaacttattgtcttacaaaatactacaaagaataacttcac 3199
|||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gagcgctccacagagggtagaacttattgtcttacaaaatactacaaagaataacttcac 540
Query: 3200 agacaatatccattgctcccaacagttaaagcaaagcttaagacatagcatagcaagcgc 3259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agacaatatccattgctcccaacagttaaagcaaagcttaagacatagcatagcaagcgc 600
Query: 3260 tttggatgcagaagggacggacgacgagctgatcaacgaagaagcgttgaagactatcta 3319
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 601 tttggatgcagaagggacggacgacgagctgatcaacgaagaagcgttgaagaccattta 660
Query: 3320 cgctcttataaaactgactaaagaaaaa 3347
||||||||||||||||||||||||||||
Sbjct: 661 cgctcttataaaactgactaaagaaaaa 688
>BF14_1301_C1
Length = 1291
Score = 254 bits (128), Expect = 1e-66
Identities = 137/140 (97%)
Strand = Plus / Minus
Query: 542 agtaacgtatatacagggtgtgaagtcccgcgacaccgacaatagatggcgctgtcagtc 601
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1291 agtaacgtatatacagggtgtgaagtccctcgacaccgacaatagatggcgctgtcagtc 1232
Query: 602 agctatcacatctattggtttaacatgctatattcatctctctgagagcaattacaaagc 661
|||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1231 agctatcagatctattggtttaacacgctatattcatctctctgagagcaattacaaagc 1172
Query: 662 tcactcaggccaagtcgccg 681
||||||||||||||||||||
Sbjct: 1171 tcactcaggccaagtcgccg 1152
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 477,632
Number of extensions: 8649
Number of successful extensions: 8649
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 8649
Number of HSP's successfully gapped: 2
Length of query: 4201
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4183
Effective length of database: 8,109,745
Effective search space: 33923063335
Effective search space used: 33923063335
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)