BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17661 (UTR included)
(2092 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1034_C1 1647 0.0
>BF14_1034_C1
Length = 862
Score = 1647 bits (831), Expect = 0.0
Identities = 852/859 (99%)
Strand = Plus / Plus
Query: 999 acaaaggcgactgcgtcgacgccttcccccgtggtcaatttggtggacgtgaacaataga 1058
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 acaaaggcgactgcgtcgacgccttcccccgtggtcaatttggtggacgtgaacaataga 63
Query: 1059 gttactgtggacagtctacaaattgctgtgggttatgagttcctcagaactccagcactt 1118
|| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 64 gtcactgtggacagtctacaaattgctgtgggttacgagttcctcagaactccagcactt 123
Query: 1119 catttggaagacggcggtgaaaaccagatctcaaaacaaagaggattccagtttataaat 1178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 catttggaagacggcggtgaaaaccagatctcaaaacaaagaggattccagtttataaat 183
Query: 1179 ccaactgaagactggttcccaggactttcagaattgaagcatgaactgcaaacatgggaa 1238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 ccaactgaagactggttcccaggactttcagaattgaagcatgaactgcaaacatgggaa 243
Query: 1239 tggtcatttggcagaactccagagttcaccgtgagcagatctttccctgtgccggaagat 1298
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 tggtcatttggcagaactccagagttcaccgtgagcagatctttccctgtgccggaagaa 303
Query: 1299 ttacttgctcctagtaaggtttactcggctactcaagagctaactattactatgacggtc 1358
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 ttacttgctcctagtaaggtttactcggctactcaagagctaactattactatgacggtg 363
Query: 1359 gagaaaggcctgatcaatgacgtcacactgaatataccgccgggtttggttgaatctggc 1418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gagaaaggcctgatcaatgacgtcacactgaatataccgccgggtttggttgaatctggc 423
Query: 1419 ttccacggggaagcctctgtcattacacaccttaaaggcaagaggttcacatcagaggcc 1478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ttccacggggaagcctctgtcattacacaccttaaaggcaagaggttcacatcagaggcc 483
Query: 1479 ctcactgcccttcaggaggcgatgcttcgtcactccgatggtgaagtcaggaaattagat 1538
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ctcactgcccttcaagaggcgatgcttcgtcactccgatggtgaagtcaggaaattagat 543
Query: 1539 gacaaagagcagtttgtagctaaatgttttgaccaagtcgtgaacactatctagatccta 1598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 gacaaagagcagtttgtagctaaatgttttgaccaagtcgtgaacactatctagatccta 603
Query: 1599 tttgtttaatcacattttcttttgttgtaagtattattattgtgattttgttattgtcca 1658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 tttgtttaatcacattttcttttgttgtaagtattattattgtgattttgttattgtcca 663
Query: 1659 ctgattgtaaattttatcactaaggtttaaaggttacaagcgattatatataaaaatata 1718
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 ctggttgtaaattttatcactaaggtttaaaggttacaagcgattatatataaaaatata 723
Query: 1719 ttttcatattatgaatgttatgtatattttcatgcttttgatactatgcttttagatgct 1778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 ttttcatattatgaatgttatgtatattttcatgcttttgatactatgcttttagatgct 783
Query: 1779 actagtgtatttttgctacttacaaatttcctttgtttttggttagtttattattttttt 1838
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 784 actagtgtatttttgctacttacaaatttcctttgtttttggttagtttatttttttttt 843
Query: 1839 tttagtttagtgattatta 1857
|||||||||||||||||||
Sbjct: 844 tttagtttagtgattatta 862
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 242,072
Number of extensions: 5083
Number of successful extensions: 5083
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5082
Number of HSP's successfully gapped: 1
Length of query: 2092
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2075
Effective length of database: 8,119,229
Effective search space: 16847400175
Effective search space used: 16847400175
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)