BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17662 (UTR included)
(1324 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_729_C3 454 e-127
BF14_729_C1 202 1e-51
BF01049A2D11 109 1e-23
BF01011A1H06 90 1e-17
>BF14_729_C3
Length = 2041
Score = 454 bits (229), Expect = e-127
Identities = 293/318 (92%), Gaps = 16/318 (5%)
Strand = Plus / Plus
Query: 428 gaagggagttactgacagaataggcaacattttgaagaaggtttccatcaaaactattta 487
|||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 1007 gaagggagttactgacagaataggcaacatcttgaagaaggtttccattaaaactattta 1066
Query: 488 caaaccacataagaaagtgagccaattcttgagaccaatcaagagtaacattcctttaca 547
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1067 caaaccacataagaaagtgagccaattcttgagaccaatcaaaagtaacattcctttaca 1126
Query: 548 acaagcgggtgtatacaaacgcgattgtgactgtggcctgtcatacattggacaggcgaa 607
|||||||||||||||||||| ||| |||||||||||| ||||||||||||||||| ||||
Sbjct: 1127 acaagcgggtgtatacaaactcgactgtgactgtggcttgtcatacattggacagacgaa 1186
Query: 608 gaggagcatcggtacaagggttaaagaacacatctcagacatcaaaaacaggcgcgcgtc 667
|||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1187 gaggagcatcggtacaagagttaaggaacacatctcagacatcaaaaacaggcgcgcgtc 1246
Query: 668 ----------------gaacacacaatggacaaaccaggccactacattcgttttgataa 711
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1247 gaagtcagcagtgtgtgaacacacaatggacaaaccaggccactacattcgttttgataa 1306
Query: 712 acctcaaatcctcgctcg 729
||||||||||||||||||
Sbjct: 1307 acctcaaatcctcgctcg 1324
Score = 250 bits (126), Expect = 5e-66
Identities = 141/146 (96%)
Strand = Plus / Plus
Query: 136 agctaccgttggcaaatctttgttacagagagcccaacacctttgagatgctgaccacct 195
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 821 agctaccgttggcaaatctttgttacagagagcccaacacctttgtgatgctgaccacct 880
Query: 196 agatgccgagctgcagcatgtaaaacatgctctcaccatcaacaacctgcccgtgcctcg 255
||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 881 agaggccgagctgcagcatgtaaaacatgctctcactatcaacaacctgcccgtgcctcg 940
Query: 256 ccagcatcgcaagaacaacttgaagc 281
|||||||||||||||| || ||||||
Sbjct: 941 ccagcatcgcaagaaccacctgaagc 966
Score = 230 bits (116), Expect = 5e-60
Identities = 137/144 (95%)
Strand = Plus / Minus
Query: 279 agctaactggatcgggtggtggtgtgagtttccattgagatacctatccgtatgtgtggg 338
|||||||||||| |||||||||||||||| |||||||| ||||| ||||||||||||||
Sbjct: 824 agctaactggatagggtggtggtgtgagtaaccattgaggtacctgtccgtatgtgtggg 765
Query: 339 tttcctataaacagtatgacccaaagtattgtcaggattcctaacgacaagtatatcaag 398
|||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 764 tttcctataaacagtatgtcccaaagtattgtcaggattcctaacaacaagtatatcaag 705
Query: 399 gaaagctaaagaattatttgcctc 422
||||||||||||||||||||||||
Sbjct: 704 gaaagctaaagaattatttgcctc 681
Score = 184 bits (93), Expect = 2e-46
Identities = 116/125 (92%)
Strand = Plus / Plus
Query: 733 gcaggacctcaagacaccgtaagcgcattctgccagcatccagagcggtacgccagaaaa 792
|||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |
Sbjct: 1470 gcaggacctcaagacaccgtgagcgcattctgccggcatccagagcggtacgccannnna 1529
Query: 793 ttaagaaatcgatggcggtagacgataaataacaaggaccaactgacagacactcacatc 852
|||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |
Sbjct: 1530 ttaagaaatcgatggcggtagatgataaataacaaggaccaactgacagacattcacacc 1589
Query: 853 tcgtc 857
|||||
Sbjct: 1590 tcgtc 1594
>BF14_729_C1
Length = 981
Score = 202 bits (102), Expect = 1e-51
Identities = 130/138 (94%), Gaps = 1/138 (0%)
Strand = Plus / Minus
Query: 430 agggagttactgacagaataggcaacattttgaagaaggtttccatcaaaactatttaca 489
|||||||||||||||||||||||||||||||||||||| |||||||||| |||||| |||
Sbjct: 142 agggagttactgacagaataggcaacattttgaagaagctttccatcaagactattcaca 83
Query: 490 aaccacataagaaagtgagccaattcttgagaccaatcaagagtaacattcctttacaac 549
|||||||||||||||||||||||||||||||||| ||||||||||||||| | || |||
Sbjct: 82 aaccacataagaaagtgagccaattcttgagacctatcaagagtaacatt-cattggaac 24
Query: 550 aagcgggtgtatacaaac 567
||||||||||||||||||
Sbjct: 23 aagcgggtgtatacaaac 6
>BF01049A2D11
Length = 776
Score = 109 bits (55), Expect = 1e-23
Identities = 61/63 (96%)
Strand = Plus / Plus
Query: 668 gaacacacaatggacaaaccaggccactacattcgttttgataaacctcaaatcctcgct 727
||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 714 gaacacacaatggacaaaccaggccactacattcggtttgataaaccacaaatcctcgct 773
Query: 728 cgt 730
|||
Sbjct: 774 cgt 776
>BF01011A1H06
Length = 739
Score = 89.7 bits (45), Expect = 1e-17
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 797 gaaatcgatggcggtagacgataaataacaaggaccaactgacagacactcacatctcgt 856
|||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||
Sbjct: 406 gaaatcgatggcggcagttgatgaataacaaggaccaactgacagacactcacatctcgt 465
Query: 857 c 857
|
Sbjct: 466 c 466
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 161,752
Number of extensions: 2856
Number of successful extensions: 2856
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 2855
Number of HSP's successfully gapped: 9
Length of query: 1324
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1307
Effective length of database: 8,119,229
Effective search space: 10611832303
Effective search space used: 10611832303
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)