BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17670 (UTR included)
(2455 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_888_C1 1526 0.0
BF14_884_C1 127 9e-29
>BF14_888_C1
Length = 845
Score = 1526 bits (770), Expect = 0.0
Identities = 776/778 (99%)
Strand = Plus / Plus
Query: 624 atccccgcgggccgggctggttccgctcaatacagcacgggggtccgtaaggtgacactc 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 atccccgcgggccgggctggttccgctcaatacagcacgggggtccgtaaggtgacactc 127
Query: 684 atccctggacacgggatcggccccgagatcacggtagctgtacagaaaatattcgaagcc 743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 atccctggacacgggatcggccccgagatcacggtagctgtacagaaaatattcgaagcc 187
Query: 744 gccaaagtacccattgaatgggacgaggtggacgtgacagctgttagaggtccggatggc 803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 gccaaagtacccattgaatgggacgaggtggacgtgacagctgttagaggtccggatggc 247
Query: 804 aaattcggtattccccaacgtgccattgattctgtcaatgccaacaagataggcctcaaa 863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 aaattcggtattccccaacgtgccattgattctgtcaatgccaacaagataggcctcaaa 307
Query: 864 ggtcccctgatgaccccagtgggtaaaggatacaggtcgttgaacttggctttaagaaaa 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ggtcccctgatgaccccagtgggtaaaggatacaggtcgttgaacttggctttaagaaaa 367
Query: 924 gagtttgatctgtatgccaatgtgaggccttgcaagagtttagacggcatcaagactctg 983
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 368 gagtttgatctgtatgccaatgtgaggccttgcaagagtttagacggcatcaagaccctg 427
Query: 984 tacgacaacgtggacgtggtgaccatcagggagaacacggagggagagtactccggcata 1043
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tacgacaacgtggacgtggtgaccatcagggagaacacggagggagagtactccggcata 487
Query: 1044 gaacacgagatagtggacggcgtggttcagtccatcaagctcatcacagaggaggccagc 1103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 gaacacgagatagtggacggcgtggttcagtccatcaagctcatcacagaggaggccagc 547
Query: 1104 aagagagtggcggagtttgcgttcaccttcgccagggacaacaagcggaagaaggtcacc 1163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 aagagagtggcggagtttgcgttcaccttcgccagggacaacaagcggaagaaggtcacc 607
Query: 1164 gccgtgcacaaagccaacatcatgcgtatgtcggacggcctgttcctgcgctgctgccgc 1223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gccgtgcacaaagccaacatcatgcgtatgtcggacggcctgttcctgcgctgctgccgc 667
Query: 1224 gagctggccacgcagttccccgacatcaagttcgaggagcgctacctggacaccgtctgc 1283
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 668 gagctggccacgcagttccctgacatcaagttcgaggagcgctacctggacaccgtctgc 727
Query: 1284 ctcaacatggtccaggacccgtccaaatttgacgtactcgtgatgccgaatctgtacgga 1343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 ctcaacatggtccaggacccgtccaaatttgacgtactcgtgatgccgaatctgtacgga 787
Query: 1344 gacatcatgtcggacatgtgctccggcctggtggggggcctcggcctcacgccgtccg 1401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 gacatcatgtcggacatgtgctccggcctggtggggggcctcggcctcacgccgtccg 845
Score = 133 bits (67), Expect = 1e-30
Identities = 67/67 (100%)
Strand = Plus / Plus
Query: 461 gcggagtatctctcgtcggcgtaaaattaaattttgtgaaatggcagcgagaataataag 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcggagtatctctcgtcggcgtaaaattaaattttgtgaaatggcagcgagaataataag 60
Query: 521 aaaaatc 527
|||||||
Sbjct: 61 aaaaatc 67
>BF14_884_C1
Length = 1091
Score = 127 bits (64), Expect = 9e-29
Identities = 70/72 (97%)
Strand = Plus / Plus
Query: 1658 ctgtgatgaaaagcccttctcgacggatctgttctgttctttgcatgtactttcctggaa 1717
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 421 ctgtgatgaaaagcccttctcgacggatctgttctattcttggcatgtactttcctggaa 480
Query: 1718 actatgttctgt 1729
||||||||||||
Sbjct: 481 actatgttctgt 492
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 319,012
Number of extensions: 7471
Number of successful extensions: 7471
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7471
Number of HSP's successfully gapped: 3
Length of query: 2455
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2438
Effective length of database: 8,119,229
Effective search space: 19794680302
Effective search space used: 19794680302
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)