BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17680 (UTR included)
(1354 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2176_C1 1076 0.0
>BF14_2176_C1
Length = 1200
Score = 1076 bits (543), Expect = 0.0
Identities = 574/584 (98%), Gaps = 4/584 (0%)
Strand = Plus / Minus
Query: 775 gtaacgatgtgtcaaagtctgagacactggcgcttaatgatcccaagtgtctctctggtt 834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 949 gtaacgatgtgtcaaagtctgagacactggcgcttaatgatcccaagtgtctctctggtt 890
Query: 835 tattttccgaaggcaattagtgcgggatccggatcagctgttcccgtgcgctaggtcgaa 894
|||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 889 tattttccaaaggcaattagtgcgggatccggctcagctgttcccgtgcgctaggtcgaa 830
Query: 895 tcatcaataacgcccgggattacccgcttctagttttaacatagacaacagcagtccagc 954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 tcatcaataacgcccgggattacccgcttctagttttaacatagacaacagcagtccagc 770
Query: 955 atgcaatcaagagtagagagaggaggagagaacatacaggcttacgaagtaatgcattta 1014
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 gtgcaatcaagagtagagagaggaggagagaacatacaggcttacgaagtaatgcattta 710
Query: 1015 tgaattatgcctacggaatattctaataaataaattcaatatagtttaaactttaaataa 1074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 tgaattatgcctacggaatattctaataaataaattcaatatagtttaaactttaaataa 650
Query: 1075 acatatttttatttggaattatataaacatatttagaa----taagtgaatttagcagct 1130
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 649 acatatttttatttggaattatataaacatatttagaataggtaagtgaatttagcagct 590
Query: 1131 acataaaaggcaatatcgatagaattaaatgactaccaggtacttatgtcattttataat 1190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 acataaaaggcaatatcgatagaattaaatgactaccaggtacttatgtcattttataat 530
Query: 1191 agtgcgtagattattgaatataatttaaaactaaagccctagagaggcggatttgacggc 1250
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 529 agtgcgtagattattgaatatattttaaaactaaagccctagagaggcggatttgacggc 470
Query: 1251 agagcatatagtataggtatcgattatcaactccgccggcactacaccgcgtcccgtgca 1310
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 agagcatatagtatatgtatcgattatcaactccgccggcactacaccgcgtcccgtgcg 410
Query: 1311 ctatgcaaaaccctaatagccgatgatatgaagatttaaagcta 1354
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ctatgcaaaaccctaatagccgatgatatgaagatttaaagcta 366
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 201,387
Number of extensions: 4869
Number of successful extensions: 4869
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4865
Number of HSP's successfully gapped: 1
Length of query: 1354
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1337
Effective length of database: 8,119,229
Effective search space: 10855409173
Effective search space used: 10855409173
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)