BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17686 (UTR included)
(1513 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01018A2G12 569 e-162
>BF01018A2G12
Length = 762
Score = 569 bits (287), Expect = e-162
Identities = 287/287 (100%)
Strand = Plus / Plus
Query: 706 aggcgtacgagcgtcgtttcccaaactgtccccagatcccggtcgtgatagactgtgtga 765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 aggcgtacgagcgtcgtttcccaaactgtccccagatcccggtcgtgatagactgtgtga 533
Query: 766 tcacggaggacagctggtccgcagacgactcccagcgacagaccaccagaagatgtcagc 825
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 tcacggaggacagctggtccgcagacgactcccagcgacagaccaccagaagatgtcagc 593
Query: 826 tcaacgtggacgcgccctacctgctcaagaagatgatcggtgtggattatatttacttca 885
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 tcaacgtggacgcgccctacctgctcaagaagatgatcggtgtggattatatttacttca 653
Query: 886 tccaaaagaatcatctggatctgaagagtcgtgtgctggagatagaagccaccaacgaga 945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 tccaaaagaatcatctggatctgaagagtcgtgtgctggagatagaagccaccaacgaga 713
Query: 946 ccttcgcctccagggtctcggtcgttgaaaactgtcgctatttcgta 992
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 ccttcgcctccagggtctcggtcgttgaaaactgtcgctatttcgta 760
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 200,167
Number of extensions: 4564
Number of successful extensions: 4564
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4564
Number of HSP's successfully gapped: 1
Length of query: 1513
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1496
Effective length of database: 8,119,229
Effective search space: 12146366584
Effective search space used: 12146366584
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)