BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17688 (UTR included)
(1915 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01011B1F03 1378 0.0
BF01008X1E10 168 2e-41
>BF01011B1F03
Length = 755
Score = 1378 bits (695), Expect = 0.0
Identities = 739/753 (98%), Gaps = 1/753 (0%)
Strand = Plus / Plus
Query: 481 aactaaggtttagacagcacatgggcaatgaaatggcacattatgcttgtgactgttggg 540
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 aactaaggtttagacagcacatgggcaatgaaatggnncattatgcttgtgactgttggg 60
Query: 541 atgcagaatgtttgaccagttacggctgggtggaatgtgtaggctgtgcagatagatcag 600
| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acgcagaatgtttgatcagttacggctgggtggaatgtgtaggctgtgcagatagatcag 120
Query: 601 cttacgacttaactcaacactctaaagctactggtataagattagctgctgagaaaaaac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cttacgacttaactcaacactctaaagctactggtataagattagctgctgagaaaaaac 180
Query: 661 taccagctcccaagcaagttgaagttgttgaggctgttgctaataaagctgcaataggaa 720
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 taccagctccaaagcaagttgaagttgttgaggctgttgctaataaagctgcaataggaa 240
Query: 721 aagaatttaaaa-aagatgcaaaaataataaatgaagccttagcctctttggatactgca 779
|||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 241 aagaatttaaaaaaagatgctaaagtaataaatgaagccttagcctctttggatactgca 300
Query: 780 gcccttgaagaattacagagtttaatggaaactgatggagagtacactcttgctacttca 839
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gctcttgaagaattacagagtttaatggaaactgatggagagtacactcttgctacttca 360
Query: 840 gctggtgagtttaaactcaacccgaacctggtgagtgtaaggaagagtcagaagactatt 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gctggtgagtttaaactcaacccgaacctggtgagtgtaaggaagagtcagaagactatt 420
Query: 900 catgttgaagaaattattccaagtgtgatagaaccatcctttggtattggaagaattctg 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 catgttgaagaaattattccaagtgtgatagaaccatcctttggtattggaagaattctg 480
Query: 960 tacagcgtccttgaacataacttcaagatgagggaaggagatgagcaaagaacatacttc 1019
|||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 481 tacagcgtacttgaacataacttcaagatgagagaaggagatgagcaaagaacatacttc 540
Query: 1020 tcgctgccagcttcagtggctccaatgaagtgtgccgttttaccactaagtggtaatact 1079
||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 541 tcgctgccagcttcagtggctccaatgaagtgtgccgttctaccactaagtggcaatact 600
Query: 1080 gaattcacccaatttgttagagaattatctcaggatcttacatcggtagatgtgtctcat 1139
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 601 gaattcacccaatttgttagagaattatcccaggatcttacatcggtagatgtgtctcat 660
Query: 1140 aaagttgatgactcatctggttctattggtaggagatacgctagaactgacgagttgggt 1199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aaagttgatgactcatctggttctattggtaggagatacgctagaactgacgagttgggt 720
Query: 1200 gtaccctatgcgattactgtcgactttgacact 1232
|||||||||||||||||||||||||||||||||
Sbjct: 721 gtaccctatgcgattactgtcgactttgacact 753
>BF01008X1E10
Length = 818
Score = 168 bits (85), Expect = 2e-41
Identities = 91/94 (96%)
Strand = Plus / Plus
Query: 1 cagccttgatgaagaggtttgatatgaagtcacctgttagtggcaatgaattgactccac 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 cagccttgatgaagnnntttgatatgaagtcacctgttagtggcaatgaattgactccac 712
Query: 61 ctatcgaattcaatcttatgtttaacactcaaat 94
||||||||||||||||||||||||||||||||||
Sbjct: 713 ctatcgaattcaatcttatgtttaacactcaaat 746
Score = 79.8 bits (40), Expect = 1e-14
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 101 acctgaaacagcacaaggcatctttgtaaactttaaacgt 140
||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 acctgaaacagcacaaggcatctttgtaaactttaaacgt 818
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 229,635
Number of extensions: 4727
Number of successful extensions: 4727
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4726
Number of HSP's successfully gapped: 3
Length of query: 1915
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1898
Effective length of database: 8,119,229
Effective search space: 15410296642
Effective search space used: 15410296642
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)