BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17697 (UTR included)
(1339 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01013A2C03 858 0.0
>BF01013A2C03
Length = 566
Score = 858 bits (433), Expect = 0.0
Identities = 445/449 (99%)
Strand = Plus / Plus
Query: 411 ggtaaaccccgaggaatacgtaccgcgcgtaagcacgtgaaccatcgcagagagcagcga 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 ggtaaaccccgaggaatacgtaccgcgcgtaagcacgtgaaccatcgcagagagcagcga 74
Query: 471 tgggcagacaaggagttcaaaaaagcccacatgggcacaaggtggaaggctaatcccttc 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 tgggcagacaaggagttcaaaaaagcccacatgggcacaaggtggaaggctaatcccttc 134
Query: 531 ggtggagcatctcacgctaagggcattgtcttggagaaagttggtgttgaagccaaacaa 590
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 135 ggtggagcatctcacgctaagggcattgtctttgagaaagttggtgttgaagccaaacaa 194
Query: 591 cctaactccgctatccgtaagtgcgtcagagtgcaacttatcaagaacggcaagaaggtg 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 cctaactccgctatccgtaagtgcgtcagagtgcaacttatcaagaacggcaagaaggtg 254
Query: 651 acagcgttcgtgcctcgtgacggttgtttgaatcacatcgaggagaacgacgaagtgctg 710
||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 255 acagcattcgtgcctcgtgacggttgtttgaaccacatcgaggagaacgacgaagtgctg 314
Query: 711 gtcgcgggattcggtcgtaagggtcacgccgtcggtgacattcccggagtcaggttcaag 770
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gttgcgggattcggtcgtaagggtcacgccgtcggtgacattcccggagtcaggttcaag 374
Query: 771 gtggtcaaggtagccaacgtatcactcctagcattgtacaaagaaaagaaggaaagacca 830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 gtggtcaaggtagccaacgtatcactcctagcattgtacaaagaaaagaaggaaagacca 434
Query: 831 agatcgtagatctacttcattgtgataag 859
|||||||||||||||||||||||||||||
Sbjct: 435 agatcgtagatctacttcattgtgataag 463
Score = 159 bits (80), Expect = 1e-38
Identities = 87/88 (98%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 1097 agtactgctgggatggtgttgctcataagtgtaaattcaaaaaaatacataaaaattaat 1156
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 462 agtactgctgggatggtgttgctcataagtgtaaattcaaaa-aatacataaaaattaat 520
Query: 1157 acacaataaacttgtgtatgacaaaaaa 1184
||||||||||||||||||||||||||||
Sbjct: 521 acacaataaacttgtgtatgacaaaaaa 548
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 191,062
Number of extensions: 4165
Number of successful extensions: 4165
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4164
Number of HSP's successfully gapped: 2
Length of query: 1339
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1322
Effective length of database: 8,119,229
Effective search space: 10733620738
Effective search space used: 10733620738
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)